Variant report

Variant	rs9476934
Chromosome Location	chr6:15795336-15795337
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1109287	0.85[YRI][hapmap]
rs12192181	1.00[CEU][hapmap];0.87[GIH][hapmap];1.00[MEX][hapmap];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12193135	0.82[EUR][1000 genomes]
rs12207114	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1883449	0.93[EUR][1000 genomes]
rs1927585	0.81[YRI][hapmap]
rs2146594	0.89[YRI][hapmap]
rs4712257	0.87[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6935121	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs742386	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs742387	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9464832	0.84[EUR][1000 genomes]
rs9476906	1.00[CEU][hapmap];0.88[YRI][hapmap];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9476911	0.80[AMR][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15791000-15796400	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr6:15791000-15798000	Enhancers	Fetal Muscle Leg	muscle
3	chr6:15791600-15796400	Enhancers	Skeletal Muscle Male	skeletal muscle
4	chr6:15792000-15795400	Weak transcription	Primary monocytes fromperipheralblood	blood
5	chr6:15792000-15795400	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr6:15792200-15796400	Weak transcription	Placenta	Placenta
7	chr6:15793200-15797600	Enhancers	Fetal Heart	heart
8	chr6:15793400-15796600	Weak transcription	Aorta	Aorta
9	chr6:15793600-15795800	Enhancers	K562	blood
10	chr6:15793800-15796800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr6:15794400-15796400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr6:15794400-15796800	Weak transcription	HMEC	breast
13	chr6:15794600-15795400	Weak transcription	HSMMtube	muscle
14	chr6:15794600-15796000	Weak transcription	Psoas Muscle	Psoas
15	chr6:15794800-15796400	Weak transcription	Left Ventricle	heart
16	chr6:15795000-15795600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links