Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs12209087	0.83[ASN][1000 genomes]
rs2038833	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4395765	0.83[ASN][1000 genomes]
rs4412244	0.83[ASN][1000 genomes]
rs4461766	0.84[ASN][1000 genomes]
rs4498397	0.83[ASN][1000 genomes]
rs4946565	0.84[ASN][1000 genomes]
rs6569197	0.83[ASN][1000 genomes]
rs6903298	0.85[ASN][1000 genomes]
rs6911380	0.85[ASN][1000 genomes]
rs6919890	0.81[ASN][1000 genomes]
rs6941235	0.83[ASN][1000 genomes]
rs9320799	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9320801	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9320805	0.91[ASN][1000 genomes]
rs9320806	0.83[ASN][1000 genomes]
rs9320807	0.83[ASN][1000 genomes]
rs9320808	0.83[ASN][1000 genomes]
rs9375022	0.83[ASN][1000 genomes]
rs9385193	0.81[ASN][1000 genomes]
rs9387942	0.84[ASN][1000 genomes]
rs9401387	0.83[ASN][1000 genomes]
rs9401388	0.86[ASN][1000 genomes]
rs9885676	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023384	chr6:121235867-121683448	Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
2	nsv530527	chr6:121298528-121789855	ZNF genes & repeats Enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
3	nsv830789	chr6:121581450-121732320	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv970057	chr6:121663325-121679145	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:121661400-121666600	Weak transcription	K562	blood

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