Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs12716673	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12871615	0.91[ASN][1000 genomes]
rs1591587	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17055062	0.96[ASN][1000 genomes]
rs2050567	0.82[CHB][hapmap];0.83[JPT][hapmap]
rs2137588	0.96[ASN][1000 genomes]
rs2137589	0.92[ASN][1000 genomes]
rs4943445	0.82[CHB][hapmap];0.83[JPT][hapmap]
rs7330721	0.82[CHB][hapmap];0.83[JPT][hapmap]
rs7331543	0.82[CHB][hapmap];0.83[JPT][hapmap]
rs7332263	0.83[JPT][hapmap]
rs7982863	0.82[CHB][hapmap];0.83[JPT][hapmap]
rs8000449	0.94[ASN][1000 genomes]
rs8001049	0.94[ASN][1000 genomes]
rs9315476	0.92[ASN][1000 genomes]
rs938216	0.82[CHB][hapmap];0.83[JPT][hapmap]
rs9532009	0.81[ASN][1000 genomes]
rs9532010	0.97[EUR][1000 genomes]
rs9532011	0.97[EUR][1000 genomes]
rs9532015	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9532016	0.99[ASN][1000 genomes]
rs9547740	0.81[ASN][1000 genomes]
rs9547741	0.97[EUR][1000 genomes]
rs9547742	0.96[EUR][1000 genomes]
rs9547750	0.91[ASN][1000 genomes]
rs9547759	0.91[ASN][1000 genomes]
rs9566195	0.96[ASN][1000 genomes]
rs9576212	0.96[ASN][1000 genomes]
rs9576216	0.96[ASN][1000 genomes]
rs9576217	0.96[ASN][1000 genomes]
rs9603148	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948975	chr13:37281203-38280430	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:37766200-37769200	Enhancers	Fetal Lung	lung
2	chr13:37766400-37769400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr13:37766400-37772000	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr13:37766600-37769800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr13:37766800-37769600	Enhancers	NHDF-Ad	bronchial
6	chr13:37767000-37769400	Enhancers	Muscle Satellite Cultured Cells	--
7	chr13:37767000-37769400	Enhancers	HUVEC	blood vessel
8	chr13:37767000-37769600	Enhancers	HMEC	breast
9	chr13:37767000-37770000	Enhancers	NH-A	brain
10	chr13:37768000-37771800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr13:37768000-37772000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr13:37768600-37769200	Enhancers	HSMM	muscle
13	chr13:37768600-37775400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr13:37768600-37775400	Weak transcription	NHLF	lung
15	chr13:37768800-37769200	Weak transcription	Osteobl	bone
16	chr13:37769000-37772600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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