Variant report

Variant	rs9547745
Chromosome Location	chr13:37785547-37785548
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11147640	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1324029	0.87[AFR][1000 genomes]
rs1588696	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17054900	1.00[CEU][hapmap]
rs1932811	0.89[AMR][1000 genomes]
rs4054542	1.00[AMR][1000 genomes]
rs4384486	1.00[AMR][1000 genomes]
rs7336363	1.00[CEU][hapmap];1.00[AMR][1000 genomes]
rs7988855	0.87[AFR][1000 genomes]
rs9532020	0.84[AFR][1000 genomes]
rs9547737	0.89[AMR][1000 genomes]
rs9547756	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948975	chr13:37281203-38280430	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv561493	chr13:37782714-37822869	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:37784600-37786600	Enhancers	Fetal Muscle Leg	muscle
2	chr13:37785400-37786000	Enhancers	Fetal Muscle Trunk	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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