Variant report

Variant	rs9590149
Chromosome Location	chr13:95630699-95630700
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:95626619..95628570-chr13:95630331..95633317,2	K562	blood:

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs11568695	1.00[TSI][hapmap]
rs11617950	1.00[ASN][1000 genomes]
rs16950404	1.00[ASN][1000 genomes]
rs16950443	1.00[ASN][1000 genomes]
rs1925870	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1925876	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1925878	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1925879	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1952108	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2148064	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2148065	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2148066	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2148067	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2182265	1.00[ASN][1000 genomes]
rs2209539	0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2209540	1.00[ASN][1000 genomes]
rs2225007	0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs41386448	1.00[ASN][1000 genomes]
rs4238311	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4771903	0.84[ASN][1000 genomes]
rs55896076	1.00[ASN][1000 genomes]
rs55943137	1.00[ASN][1000 genomes]
rs60329452	1.00[ASN][1000 genomes]
rs60833033	0.91[ASN][1000 genomes]
rs61695658	1.00[ASN][1000 genomes]
rs66562849	1.00[ASN][1000 genomes]
rs66796852	0.91[ASN][1000 genomes]
rs67670273	0.91[ASN][1000 genomes]
rs72640796	1.00[ASN][1000 genomes]
rs72640799	1.00[ASN][1000 genomes]
rs72642310	1.00[ASN][1000 genomes]
rs72642313	1.00[ASN][1000 genomes]
rs72642322	0.91[ASN][1000 genomes]
rs72642324	0.91[ASN][1000 genomes]
rs7332543	0.91[ASN][1000 genomes]
rs7990475	1.00[ASN][1000 genomes]
rs8002563	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9302029	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs9302030	0.87[AFR][1000 genomes]
rs9302031	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9524731	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs9524740	1.00[ASN][1000 genomes]
rs9524743	1.00[ASN][1000 genomes]
rs9524744	1.00[ASN][1000 genomes]
rs9524746	1.00[ASN][1000 genomes]
rs9584270	1.00[ASN][1000 genomes]
rs9590146	1.00[ASN][1000 genomes]
rs9590147	1.00[ASN][1000 genomes]
rs9590153	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv974230	chr13:95630218-95632750	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95627200-95635800	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr13:95627800-95631200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr13:95627800-95633400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr13:95630200-95632200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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