Variant report

Variant	rs9619234
Chromosome Location	chr22:32208504-32208505
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	22:31936958-31958600..22:32188129-32210582	K562	blood:
2	22:32188129-32210582..22:32846948-32860159	K562	blood:

Variant related genes	Relation type
ENSG00000214093	Chromatin interaction
ENSG00000184459	Chromatin interaction

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11089527	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs131244	0.85[EUR][1000 genomes]
rs131245	0.85[EUR][1000 genomes]
rs131250	0.86[EUR][1000 genomes]
rs131253	0.86[EUR][1000 genomes]
rs2012150	0.86[EUR][1000 genomes]
rs2108108	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs5994427	0.86[EUR][1000 genomes]
rs5994430	0.83[ASN][1000 genomes]
rs5994431	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5994432	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5998119	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs5998121	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs5998122	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs5998126	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs5998131	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs5998136	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62238892	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7290856	0.99[EUR][1000 genomes]
rs8141214	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9621327	0.86[EUR][1000 genomes]

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:32150800-32212800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr22:32151000-32210800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr22:32151400-32217400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr22:32172200-32254400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr22:32172800-32221000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr22:32175200-32213800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr22:32182200-32209800	Strong transcription	Fetal Stomach	stomach
8	chr22:32187800-32222000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr22:32188000-32220000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr22:32188600-32222600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr22:32188800-32210200	Strong transcription	Fetal Intestine Small	intestine
12	chr22:32188800-32214200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr22:32188800-32259600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
14	chr22:32189800-32225200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr22:32192200-32209600	Strong transcription	Fetal Intestine Large	intestine
16	chr22:32192400-32242200	Strong transcription	Primary monocytes fromperipheralblood	blood
17	chr22:32192400-32251000	Strong transcription	Primary T helper cells fromperipheralblood	blood
18	chr22:32192400-32266600	Strong transcription	Monocytes-CD14+_RO01746	blood
19	chr22:32192800-32220000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
20	chr22:32193000-32208600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
21	chr22:32193000-32250600	Strong transcription	Primary T cells fromperipheralblood	blood
22	chr22:32193200-32208600	Strong transcription	Liver	Liver
23	chr22:32193200-32209400	Strong transcription	Duodenum Mucosa	Duodenum
24	chr22:32193200-32226800	Strong transcription	Fetal Muscle Trunk	muscle
25	chr22:32193200-32228400	Strong transcription	Adipose Nuclei	Adipose
26	chr22:32193200-32246000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
27	chr22:32193200-32250600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr22:32193400-32220200	Strong transcription	Primary B cells from peripheral blood	blood
29	chr22:32196600-32210800	Weak transcription	NHLF	lung
30	chr22:32196600-32224800	Weak transcription	Hela-S3	cervix
31	chr22:32197200-32214400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr22:32197200-32251000	Strong transcription	Primary B cells from cord blood	blood
33	chr22:32197400-32219800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
34	chr22:32198000-32209200	Weak transcription	Pancreatic Islets	Pancreatic Islet
35	chr22:32199000-32209200	Weak transcription	Stomach Mucosa	stomach
36	chr22:32199000-32213600	Weak transcription	K562	blood
37	chr22:32199000-32213800	Weak transcription	NHDF-Ad	bronchial
38	chr22:32199600-32210800	Weak transcription	H9 Cell Line	embryonic stem cell
39	chr22:32200000-32213600	Weak transcription	Fetal Kidney	kidney
40	chr22:32200400-32210400	Weak transcription	Colon Smooth Muscle	Colon
41	chr22:32200400-32214000	Weak transcription	Fetal Brain Male	brain
42	chr22:32201000-32214000	Weak transcription	Fetal Heart	heart
43	chr22:32201400-32210200	Weak transcription	Fetal Lung	lung
44	chr22:32201600-32210400	Weak transcription	Muscle Satellite Cultured Cells	--
45	chr22:32201600-32213800	Weak transcription	A549	lung
46	chr22:32201600-32214400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
47	chr22:32201800-32210800	Weak transcription	Small Intestine	intestine
48	chr22:32202400-32213600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
49	chr22:32202800-32210400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
50	chr22:32202800-32210600	Weak transcription	Brain Angular Gyrus	brain

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