Variant report
| Variant | rs9632759 |
|---|---|
| Chromosome Location | chr7:127075669-127075670 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr7:127030926..127033308-chr7:127074785..127077650,3 | K562 | blood: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000048405 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:34)
| rs_ID | r2[population] |
|---|---|
| rs10243318 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.84[EUR][1000 genomes] |
| rs10250993 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes] |
| rs10279667 | 0.84[EUR][1000 genomes] |
| rs10954154 | 0.82[EUR][1000 genomes] |
| rs11563330 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.84[EUR][1000 genomes] |
| rs11563457 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.84[EUR][1000 genomes] |
| rs11563465 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs11563640 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs11971734 | 0.84[EUR][1000 genomes] |
| rs12533653 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12535410 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12706781 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12706782 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12706793 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes] |
| rs12706794 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.84[EUR][1000 genomes] |
| rs13222357 | 1.00[CHB][hapmap] |
| rs13223068 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs13234675 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs13239894 | 1.00[JPT][hapmap] |
| rs1345206 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs1557639 | 1.00[CHB][hapmap] |
| rs17862361 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs17862375 | 1.00[CHB][hapmap] |
| rs17864191 | 1.00[CHB][hapmap] |
| rs17864199 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs17864200 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs17864202 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs17864920 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs17867841 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs2106175 | 1.00[JPT][hapmap] |
| rs2402856 | 1.00[CHB][hapmap] |
| rs6947541 | 0.84[EUR][1000 genomes] |
| rs6957751 | 1.00[CHB][hapmap] |
| rs6978075 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv1973714 | chr7:127075670-127075671 | Inactive region | Chromatin interactive region | 1 gene(s) | inside rSNPs | n/a |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
