Variant report

Variant	rs6947541
Chromosome Location	chr7:127078767-127078768
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10243318	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10250993	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10279667	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10954154	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11563330	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11563457	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11563465	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11563640	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11971734	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12533653	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12535410	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs12706781	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12706782	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs12706793	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12706794	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13222357	1.00[CHB][hapmap]
rs13223068	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs13234675	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13239894	1.00[JPT][hapmap]
rs13246076	0.82[ASN][1000 genomes]
rs1345206	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs1361948	0.82[ASN][1000 genomes]
rs1557639	1.00[CHB][hapmap]
rs17862361	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17862375	1.00[CHB][hapmap]
rs17864191	1.00[CHB][hapmap]
rs17864199	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17864200	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17864202	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17864920	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs17867841	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs17869209	0.82[ASN][1000 genomes]
rs1894725	0.82[ASN][1000 genomes]
rs1894726	0.82[ASN][1000 genomes]
rs2106175	1.00[JPT][hapmap]
rs2402856	1.00[CHB][hapmap]
rs6957751	1.00[CHB][hapmap]
rs6978075	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9632759	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:127077400-127079000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr7:127077400-127079200	Enhancers	HSMMtube	muscle
3	chr7:127077400-127079400	Enhancers	NHLF	lung
4	chr7:127077400-127079800	Enhancers	HSMM	muscle
5	chr7:127078400-127078800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr7:127078600-127079200	Enhancers	Osteobl	bone
7	chr7:127078600-127079400	Enhancers	Muscle Satellite Cultured Cells	--

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