Variant report

Variant	rs9636942
Chromosome Location	chr21:39972236-39972237
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:39967269..39970504-chr21:39970532..39972631,3	MCF-7	breast:

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs2155717	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2186921	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2836545	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836556	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2836557	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2836558	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2836559	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2836560	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2836561	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2836562	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2836563	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2836564	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2836567	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2836568	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2836570	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs56133221	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs56681372	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs58779165	0.83[EUR][1000 genomes]
rs60509736	0.90[ASN][1000 genomes]
rs60674021	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6517473	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7278530	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7278549	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7281963	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73432161	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73432179	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73432180	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73906359	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8128265	0.82[ASN][1000 genomes]
rs8128691	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8128701	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8129444	0.92[EUR][1000 genomes]
rs8130668	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8133374	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8133674	0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39969000-39976600	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr21:39969400-39973000	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr21:39970200-39977200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr21:39970400-39976600	Weak transcription	Fetal Brain Male	brain
5	chr21:39971200-39972400	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland

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