Variant report

Variant	rs56681372
Chromosome Location	chr21:39981999-39982000
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:39977468..39979671-chr21:39981051..39984898,3	MCF-7	breast:

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs1041779	0.85[AMR][1000 genomes]
rs11911299	0.87[AFR][1000 genomes]
rs2155717	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2186921	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836545	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2836556	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836557	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836558	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836559	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836560	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836561	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836562	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836563	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836564	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836567	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836568	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836570	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836571	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs34171058	0.85[AFR][1000 genomes]
rs34190239	0.84[AFR][1000 genomes]
rs34241145	0.85[AFR][1000 genomes]
rs35361275	0.86[AFR][1000 genomes]
rs56133221	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56303556	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs58779165	0.83[EUR][1000 genomes]
rs60509736	0.95[ASN][1000 genomes]
rs60674021	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6517473	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7278530	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7278549	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7281963	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73432161	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73432179	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73432180	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73906359	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73908324	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs8128265	0.87[ASN][1000 genomes]
rs8128691	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8128701	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8129444	0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8130668	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8133374	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8133674	0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9636942	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39973000-39982000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr21:39977600-39982200	Weak transcription	Aorta	Aorta
3	chr21:39981400-39983400	Enhancers	Monocytes-CD14+_RO01746	blood
4	chr21:39981600-39982800	Enhancers	Primary monocytes fromperipheralblood	blood

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