Variant report
| Variant | rs11911299 |
|---|---|
| Chromosome Location | chr21:39984146-39984147 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:3 , 50 per page) page:
1
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:31)
| rs_ID | r2[population] |
|---|---|
| rs1041779 | 0.96[YRI][hapmap];0.89[AFR][1000 genomes] |
| rs16996585 | 0.88[YRI][hapmap];0.80[AFR][1000 genomes] |
| rs2155717 | 0.85[YRI][hapmap] |
| rs2186921 | 0.85[YRI][hapmap] |
| rs2836556 | 0.84[YRI][hapmap] |
| rs2836557 | 0.85[YRI][hapmap] |
| rs2836559 | 0.85[YRI][hapmap] |
| rs2836561 | 0.85[YRI][hapmap] |
| rs2836564 | 0.81[YRI][hapmap] |
| rs2836567 | 0.82[YRI][hapmap] |
| rs2836568 | 0.85[YRI][hapmap] |
| rs2836570 | 0.85[YRI][hapmap] |
| rs2836571 | 1.00[YRI][hapmap];0.97[AFR][1000 genomes] |
| rs2836573 | 0.85[YRI][hapmap] |
| rs2836574 | 0.88[YRI][hapmap];0.80[AFR][1000 genomes] |
| rs2836577 | 0.85[YRI][hapmap] |
| rs34171058 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs34190239 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs34241145 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs35361275 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs35854434 | 0.88[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs56303556 | 0.97[AFR][1000 genomes] |
| rs56681372 | 0.87[AFR][1000 genomes] |
| rs60674021 | 0.82[AFR][1000 genomes] |
| rs61121259 | 0.80[AFR][1000 genomes] |
| rs6517473 | 0.85[YRI][hapmap] |
| rs7278549 | 0.87[YRI][hapmap] |
| rs73442412 | 0.80[AFR][1000 genomes] |
| rs73442433 | 0.80[AFR][1000 genomes] |
| rs73908324 | 0.98[AFR][1000 genomes] |
| rs8130668 | 0.84[YRI][hapmap] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr21:39982000-39984200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 2 | chr21:39983800-39985400 | Weak transcription | Aorta | Aorta |
