Variant report

Variant	rs1041779
Chromosome Location	chr21:39988370-39988371
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:39982948..39986321-chr21:39986982..39990091,3	K562	blood:

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs1013071	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11911299	0.96[YRI][hapmap];0.89[AFR][1000 genomes]
rs16996585	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16996589	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2155717	1.00[CEU][hapmap];0.92[YRI][hapmap]
rs2186921	1.00[CEU][hapmap];0.92[YRI][hapmap]
rs2836540	1.00[CEU][hapmap]
rs2836545	1.00[CEU][hapmap]
rs2836556	1.00[CEU][hapmap];0.91[YRI][hapmap]
rs2836557	1.00[CEU][hapmap];0.92[YRI][hapmap]
rs2836559	1.00[CEU][hapmap];0.92[YRI][hapmap]
rs2836561	1.00[CEU][hapmap];0.92[YRI][hapmap]
rs2836564	1.00[CEU][hapmap];0.89[YRI][hapmap]
rs2836567	0.90[YRI][hapmap]
rs2836568	1.00[CEU][hapmap];0.92[YRI][hapmap]
rs2836570	1.00[CEU][hapmap];0.92[YRI][hapmap]
rs2836571	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836573	0.92[YRI][hapmap]
rs2836574	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836575	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836577	0.92[YRI][hapmap];0.80[AFR][1000 genomes]
rs34171058	0.85[AFR][1000 genomes]
rs34190239	0.88[AFR][1000 genomes]
rs34241145	0.85[AFR][1000 genomes]
rs35361275	0.90[AFR][1000 genomes]
rs56303556	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56681372	0.85[AMR][1000 genomes]
rs58550284	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61121259	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6517473	1.00[CEU][hapmap];0.92[YRI][hapmap]
rs7276220	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7278549	1.00[CEU][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap]
rs7281963	1.00[JPT][hapmap]
rs73442412	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73442419	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73442433	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73442435	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73908324	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8130668	1.00[CEU][hapmap];0.91[YRI][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39986800-39989200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr21:39986800-39990800	Weak transcription	Aorta	Aorta

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