Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11854039	0.81[AFR][1000 genomes]
rs11854557	0.81[AFR][1000 genomes]
rs11857773	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11858814	0.88[AFR][1000 genomes]
rs12899422	0.88[AFR][1000 genomes]
rs12900838	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12901353	0.81[AFR][1000 genomes]
rs12905094	0.88[AFR][1000 genomes]
rs17393761	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17435932	0.81[AFR][1000 genomes]
rs17472989	0.88[AFR][1000 genomes]
rs1961393	0.81[AFR][1000 genomes]
rs2289389	0.88[AFR][1000 genomes]
rs34562714	0.81[AFR][1000 genomes]
rs34748066	0.81[AFR][1000 genomes]
rs4775794	0.82[AFR][1000 genomes]
rs4775806	0.81[AFR][1000 genomes]
rs55645655	0.84[EUR][1000 genomes]
rs55979115	0.81[AFR][1000 genomes]
rs62009762	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs62009834	0.81[AFR][1000 genomes]
rs71467664	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7180168	0.81[AFR][1000 genomes]
rs8043493	0.88[AFR][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs9672848	SECISBP2L	cis	brain	BrainEAC
rs9672848	SECISBP2L	cis	intralobular white matter	BrainEAC

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:49364800-49367800	Weak transcription	Hela-S3	cervix

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