The 2.0 version of rSNPBase

Variant report

Variant rs11857773
Chromosome Location chr15:49397405-49397406
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49376400-49397800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr15:49376600-49397600 Weak transcription NHLF lung
3 chr15:49381400-49402400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr15:49381600-49398000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr15:49382600-49402400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr15:49385600-49403200 Weak transcription Placenta Placenta
7 chr15:49386400-49403400 Weak transcription Brain Hippocampus Middle brain
8 chr15:49386400-49404200 Weak transcription Brain Inferior Temporal Lobe brain
9 chr15:49386800-49402600 Weak transcription Gastric stomach
10 chr15:49387200-49397600 Weak transcription HSMMtube muscle
11 chr15:49387200-49397800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr15:49387200-49402400 Weak transcription Spleen Spleen
13 chr15:49387200-49403000 Weak transcription Dnd41 blood
14 chr15:49387400-49404200 Weak transcription Placenta Amnion Placenta Amnion
15 chr15:49388800-49402400 Weak transcription Fetal Intestine Small intestine
16 chr15:49388800-49402400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr15:49388800-49402600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr15:49388800-49402600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr15:49388800-49402600 Weak transcription Left Ventricle heart
20 chr15:49388800-49402600 Weak transcription Ovary ovary
21 chr15:49388800-49402600 Weak transcription Pancreas Pancrea
22 chr15:49388800-49402600 Weak transcription Thymus Thymus
23 chr15:49388800-49402800 Weak transcription Lung lung
24 chr15:49388800-49404400 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr15:49388800-49404600 Weak transcription Hela-S3 cervix
26 chr15:49388800-49418800 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr15:49388800-49434800 Weak transcription Small Intestine intestine
28 chr15:49389600-49404400 Weak transcription HepG2 liver
29 chr15:49390400-49403000 Weak transcription Aorta Aorta
30 chr15:49390800-49403000 Weak transcription Stomach Smooth Muscle stomach
31 chr15:49391200-49398000 Weak transcription Primary hematopoietic stem cells blood
32 chr15:49391200-49402400 Weak transcription Fetal Muscle Trunk muscle
33 chr15:49391400-49402400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr15:49391400-49402600 Weak transcription Fetal Muscle Leg muscle
35 chr15:49391400-49404200 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr15:49391600-49397800 Weak transcription NHDF-Ad bronchial
37 chr15:49391600-49402400 Weak transcription Esophagus oesophagus
38 chr15:49391600-49402600 Weak transcription Fetal Stomach stomach
39 chr15:49391800-49397600 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr15:49391800-49403400 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr15:49392000-49402400 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr15:49392000-49403200 Weak transcription Fetal Thymus thymus
43 chr15:49392200-49402600 Weak transcription Psoas Muscle Psoas
44 chr15:49392400-49403000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr15:49393400-49402800 Weak transcription A549 lung
46 chr15:49393600-49402400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr15:49393600-49404200 Weak transcription Brain Anterior Caudate brain
48 chr15:49393600-49404200 Weak transcription Brain Substantia Nigra brain
49 chr15:49393600-49413200 Weak transcription HMEC breast
50 chr15:49393800-49397600 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015