Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10000697	0.81[CEU][hapmap]
rs10023965	0.81[CEU][hapmap]
rs1076015	0.88[YRI][hapmap]
rs11929757	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12331018	0.81[CEU][hapmap]
rs12503495	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13108343	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13114985	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13129278	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17461709	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2078610	0.96[YRI][hapmap]
rs28595697	0.88[EUR][1000 genomes]
rs4235146	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4396966	0.88[YRI][hapmap]
rs4495018	0.80[CEU][hapmap]
rs4508859	1.00[JPT][hapmap]
rs4518219	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6447546	0.81[CEU][hapmap]
rs6852448	0.95[YRI][hapmap]
rs7674333	0.83[CEU][hapmap]
rs7687439	0.81[CEU][hapmap]
rs7692788	0.87[YRI][hapmap]
rs9291305	0.81[CEU][hapmap]
rs9917915	0.83[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998919	chr4:47207023-47476876	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv879004	chr4:47234200-47322190	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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