Variant report

Variant	rs9726410
Chromosome Location	chr1:85283572-85283573
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs12024356	0.88[YRI][hapmap]
rs12083032	0.86[ASN][1000 genomes]
rs12130014	0.88[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1326002	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1409213	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1409214	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2892843	0.86[ASN][1000 genomes]
rs4907004	0.84[ASN][1000 genomes]
rs4907007	0.88[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9729034	1.00[CHB][hapmap];0.95[JPT][hapmap];0.89[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:85264000-85295600	Weak transcription	NHEK	skin
2	chr1:85266400-85287200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr1:85277000-85285400	Weak transcription	Left Ventricle	heart
4	chr1:85277200-85284800	Weak transcription	Fetal Heart	heart
5	chr1:85278200-85287200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr1:85281200-85289200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr1:85282400-85295800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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