Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10501061	0.97[AFR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11029669	0.89[JPT][hapmap]
rs12271956	0.86[CHB][hapmap]
rs12807548	0.89[JPT][hapmap];1.00[YRI][hapmap]
rs1690067	0.89[JPT][hapmap]
rs172415	0.88[JPT][hapmap]
rs17309300	0.88[JPT][hapmap]
rs17309342	0.97[AFR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs188389	0.82[JPT][hapmap]
rs293932	0.88[JPT][hapmap]
rs293934	0.88[JPT][hapmap]
rs293955	0.89[JPT][hapmap]
rs293998	0.82[JPT][hapmap]
rs375928	0.89[JPT][hapmap]
rs3802753	0.82[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs381229	0.89[JPT][hapmap]
rs439961	0.88[JPT][hapmap]
rs4543935	0.97[AFR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7114361	0.89[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs7128731	0.86[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044544	chr11:26506962-26967285	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	nsv916187	chr11:26576875-27328603	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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