Variant report

Variant	rs9782963
Chromosome Location	chr1:209319745-209319746
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11119236	1.00[AMR][1000 genomes]
rs11119243	1.00[AMR][1000 genomes]
rs11119246	1.00[AMR][1000 genomes]
rs11119249	1.00[AMR][1000 genomes]
rs11119250	1.00[AMR][1000 genomes]
rs12067172	1.00[AMR][1000 genomes]
rs12071550	1.00[AMR][1000 genomes]
rs12072789	1.00[AMR][1000 genomes]
rs12073260	1.00[AMR][1000 genomes]
rs12076575	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12077614	1.00[AMR][1000 genomes]
rs12079171	1.00[AMR][1000 genomes]
rs12079883	1.00[AMR][1000 genomes]
rs12080089	1.00[AMR][1000 genomes]
rs12081438	1.00[AMR][1000 genomes]
rs12088612	1.00[AMR][1000 genomes]
rs12095589	1.00[AMR][1000 genomes]
rs12096528	1.00[AMR][1000 genomes]
rs12354318	1.00[AMR][1000 genomes]
rs9782983	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873137	chr1:209301571-209338673	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:209317800-209328400	Weak transcription	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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