Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs11775809	0.83[ASN][1000 genomes]
rs11776808	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11782521	0.87[EUR][1000 genomes]
rs11784744	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2446442	0.83[ASN][1000 genomes]
rs2446443	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2446446	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2446447	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2446449	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2469256	0.83[ASN][1000 genomes]
rs2469257	0.83[ASN][1000 genomes]
rs2469258	0.83[ASN][1000 genomes]
rs2469261	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2469265	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2469267	0.83[ASN][1000 genomes]
rs2469268	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2469270	0.82[ASN][1000 genomes]
rs2469272	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2469273	0.83[ASN][1000 genomes]
rs2469274	0.83[ASN][1000 genomes]
rs2469283	0.83[ASN][1000 genomes]
rs2469285	0.83[ASN][1000 genomes]
rs2469291	0.83[ASN][1000 genomes]
rs2469292	0.83[ASN][1000 genomes]
rs2469293	0.82[ASN][1000 genomes]
rs2469294	0.83[ASN][1000 genomes]
rs2469303	0.81[ASN][1000 genomes]
rs4737769	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56026833	0.83[ASN][1000 genomes]
rs56054054	0.83[ASN][1000 genomes]
rs936430	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67172600-67186200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:67182400-67186400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr8:67182400-67190000	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr8:67182600-67182800	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr8:67182600-67185600	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr8:67182600-67190200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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