The 2.0 version of rSNPBase

Variant report

Variant rs981479
Chromosome Location chr3:105506044-105506045
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:105467600-105509400 Weak transcription Stomach Mucosa stomach
2 chr3:105478600-105509400 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr3:105478600-105511200 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr3:105481400-105509600 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr3:105481800-105507400 Weak transcription HSMM muscle
6 chr3:105482000-105509200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr3:105482000-105509600 Weak transcription Ovary ovary
8 chr3:105482000-105510800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr3:105482000-105511200 Weak transcription Aorta Aorta
10 chr3:105482800-105517400 Weak transcription Fetal Intestine Large intestine
11 chr3:105483200-105506200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr3:105483200-105555200 Weak transcription Placenta Placenta
13 chr3:105486800-105519000 Weak transcription Esophagus oesophagus
14 chr3:105487000-105508400 Weak transcription Fetal Lung lung
15 chr3:105487200-105508400 Weak transcription Fetal Kidney kidney
16 chr3:105489600-105509600 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr3:105489600-105525400 Weak transcription Fetal Intestine Small intestine
18 chr3:105493000-105511200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr3:105493000-105511200 Weak transcription Right Atrium heart
20 chr3:105493200-105509000 Weak transcription Muscle Satellite Cultured Cells --
21 chr3:105494000-105506200 Weak transcription Primary hematopoietic stem cells blood
22 chr3:105494400-105509400 Weak transcription Primary B cells from cord blood blood
23 chr3:105494400-105516200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr3:105495000-105509600 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr3:105495400-105517200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr3:105495600-105509400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr3:105496400-105510800 Weak transcription Right Ventricle heart
28 chr3:105496400-105514000 Weak transcription Lung lung
29 chr3:105500600-105507400 Enhancers Primary T killer naive cells fromperipheralblood blood
30 chr3:105500800-105506800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
31 chr3:105500800-105507600 Enhancers Primary T helper cells fromperipheralblood blood
32 chr3:105501200-105508400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr3:105501200-105509400 Weak transcription Colon Smooth Muscle Colon
34 chr3:105501200-105509600 Weak transcription Small Intestine intestine
35 chr3:105501800-105509400 Weak transcription Left Ventricle heart
36 chr3:105501800-105516600 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr3:105503200-105507000 Enhancers Primary T helper naive cells fromperipheralblood blood
38 chr3:105504000-105506600 Weak transcription Primary T cells from cord blood blood
39 chr3:105504000-105508000 Enhancers Primary T helper cells PMA-I stimulated --
40 chr3:105504200-105506400 Enhancers Fetal Heart heart
41 chr3:105504200-105507200 Enhancers Primary T killer memory cells from peripheral blood blood
42 chr3:105504400-105507000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr3:105504400-105507200 Enhancers Primary T helper naive cells from peripheral blood blood
44 chr3:105505000-105507600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
45 chr3:105505000-105508200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr3:105505000-105509600 Weak transcription Brain Hippocampus Middle brain
47 chr3:105505000-105527800 Weak transcription Pancreas Pancrea
48 chr3:105505000-105548200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr3:105505200-105506400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr3:105505200-105506400 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015