Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11128091	0.87[ASN][1000 genomes]
rs12163576	0.90[ASN][1000 genomes]
rs13087144	0.91[AMR][1000 genomes]
rs13433766	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13433979	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1489996	0.88[ASN][1000 genomes]
rs17047972	0.83[ASN][1000 genomes]
rs1813868	0.85[ASN][1000 genomes]
rs1873264	0.90[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2130439	0.85[AMR][1000 genomes]
rs2171868	0.87[ASN][1000 genomes]
rs35508315	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs36038335	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4093385	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs56109105	0.87[ASN][1000 genomes]
rs56889723	0.88[ASN][1000 genomes]
rs58972171	0.87[ASN][1000 genomes]
rs59548135	0.85[ASN][1000 genomes]
rs62254074	0.91[EUR][1000 genomes]
rs6773337	0.90[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs72925108	0.87[ASN][1000 genomes]
rs7623995	0.87[ASN][1000 genomes]
rs870241	0.87[ASN][1000 genomes]
rs971092	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834722	chr3:68775036-68974120	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68796200-68805000	Weak transcription	Aorta	Aorta
2	chr3:68799800-68808800	Weak transcription	Stomach Smooth Muscle	stomach
3	chr3:68801400-68807800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr3:68801800-68803000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood

Quick Search: