Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11128091	0.80[ASN][1000 genomes]
rs11918673	0.88[EUR][1000 genomes]
rs13072126	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13433766	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13433979	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1873264	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2130439	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs35508315	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs36038335	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4093385	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs57640416	0.86[ASN][1000 genomes]
rs6773337	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72925176	0.88[ASN][1000 genomes]
rs7620715	0.88[EUR][1000 genomes]
rs7621862	0.84[ASN][1000 genomes]
rs931433	0.87[ASN][1000 genomes]
rs971092	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9817400	0.91[AMR][1000 genomes]
rs9818001	0.85[EUR][1000 genomes]
rs9866665	0.91[EUR][1000 genomes]
rs9867187	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834722	chr3:68775036-68974120	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv876930	chr3:68844213-68961010	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68844200-68846600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

Quick Search: