Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11918673	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13087144	0.85[EUR][1000 genomes]
rs13433766	0.80[EUR][1000 genomes]
rs1873264	0.84[EUR][1000 genomes]
rs2130438	0.90[ASN][1000 genomes]
rs2130439	0.89[EUR][1000 genomes]
rs36038335	0.82[EUR][1000 genomes]
rs62254074	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6773337	0.86[EUR][1000 genomes]
rs7610324	0.81[AMR][1000 genomes]
rs7620715	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs971092	0.84[EUR][1000 genomes]
rs9756872	0.84[AMR][1000 genomes]
rs9756925	0.84[AMR][1000 genomes]
rs9758139	0.84[AMR][1000 genomes]
rs9812554	0.84[AMR][1000 genomes]
rs9822074	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs9858460	0.83[AMR][1000 genomes]
rs9866665	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9867187	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9880237	0.82[AMR][1000 genomes]
rs9880420	0.84[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv525867	chrX:137580983-138439843	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:137885600-137940200	Weak transcription	K562	blood

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