Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11918673	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13072126	0.84[EUR][1000 genomes]
rs13087144	0.91[EUR][1000 genomes]
rs13433766	0.85[EUR][1000 genomes]
rs13433979	0.84[EUR][1000 genomes]
rs1873264	0.89[EUR][1000 genomes]
rs2130438	0.83[ASN][1000 genomes]
rs2130439	0.89[EUR][1000 genomes]
rs35508315	0.83[EUR][1000 genomes]
rs36038335	0.86[EUR][1000 genomes]
rs4093385	0.85[EUR][1000 genomes]
rs62254074	0.87[AMR][1000 genomes]
rs6773337	0.90[EUR][1000 genomes]
rs7620715	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs971092	0.89[EUR][1000 genomes]
rs9756872	0.82[AMR][1000 genomes]
rs9756925	0.82[AMR][1000 genomes]
rs9758139	0.82[AMR][1000 genomes]
rs9812554	0.82[AMR][1000 genomes]
rs9818001	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9822074	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9858460	0.83[AMR][1000 genomes]
rs9866665	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9880420	0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834722	chr3:68775036-68974120	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv876930	chr3:68844213-68961010	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68844200-68846600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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