The 2.0 version of rSNPBase

Variant report

Variant rs9853744
Chromosome Location chr3:69226700-69226701
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:69209600-69228000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr3:69211200-69229400 Weak transcription Fetal Brain Male brain
3 chr3:69211600-69230200 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr3:69211600-69231000 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr3:69214800-69230400 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr3:69216000-69227200 Weak transcription Pancreas Pancrea
7 chr3:69216200-69229800 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr3:69217200-69230200 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr3:69217400-69229800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr3:69217600-69227400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr3:69217600-69230600 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr3:69218400-69230000 Weak transcription Hela-S3 cervix
13 chr3:69218400-69247400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr3:69218400-69247800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr3:69218600-69228000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr3:69218600-69228200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr3:69218600-69228400 Weak transcription Adipose Nuclei Adipose
18 chr3:69218800-69227600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
19 chr3:69218800-69228400 Weak transcription Colonic Mucosa Colon
20 chr3:69219000-69227200 Weak transcription Small Intestine intestine
21 chr3:69219200-69230000 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr3:69219400-69227000 Weak transcription Rectal Smooth Muscle rectum
23 chr3:69219600-69227000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr3:69219800-69230800 Strong transcription Placenta Placenta
25 chr3:69220600-69229600 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr3:69220800-69229800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr3:69220800-69231600 Weak transcription Psoas Muscle Psoas
28 chr3:69221000-69227000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr3:69221000-69227000 Weak transcription Gastric stomach
30 chr3:69221000-69227000 Weak transcription Thymus Thymus
31 chr3:69221000-69227400 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr3:69221000-69227400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr3:69221000-69228200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr3:69221000-69229400 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr3:69221000-69230000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr3:69221200-69227200 Weak transcription Right Ventricle heart
37 chr3:69221200-69227400 Weak transcription Fetal Heart heart
38 chr3:69221200-69229400 Weak transcription Left Ventricle heart
39 chr3:69221200-69229800 Weak transcription Aorta Aorta
40 chr3:69221400-69227200 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr3:69221400-69229000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr3:69222000-69229400 Weak transcription HSMM muscle
43 chr3:69222200-69227000 Weak transcription HMEC breast
44 chr3:69222400-69227000 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr3:69222800-69237400 Strong transcription Dnd41 blood
46 chr3:69222800-69245400 Strong transcription Primary neutrophils fromperipheralblood blood
47 chr3:69223400-69232600 Strong transcription Primary hematopoietic stem cells blood
48 chr3:69223400-69237600 Strong transcription Primary monocytes fromperipheralblood blood
49 chr3:69223800-69227800 Strong transcription NHEK skin
50 chr3:69224200-69228000 Weak transcription Osteobl bone

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Last update: Aug 31, 2015