Variant report
| Variant | rs9899662 |
|---|---|
| Chromosome Location | chr17:53526236-53526237 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr17:53499400-53528000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr17:53522400-53527800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 3 | chr17:53522600-53527000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 4 | chr17:53522600-53529600 | Weak transcription | HMEC | breast |
| 5 | chr17:53522800-53526800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 6 | chr17:53522800-53529600 | Weak transcription | NH-A | brain |
| 7 | chr17:53522800-53531200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 8 | chr17:53523000-53528000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 9 | chr17:53523600-53528000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 10 | chr17:53524000-53534000 | Enhancers | HepG2 | liver |
| 11 | chr17:53524200-53527000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 12 | chr17:53524200-53529600 | Weak transcription | GM12878-XiMat | blood |
| 13 | chr17:53524400-53527400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 14 | chr17:53524400-53527600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 15 | chr17:53524400-53528000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 16 | chr17:53524600-53527000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 17 | chr17:53524600-53527000 | Weak transcription | Small Intestine | intestine |
| 18 | chr17:53524600-53527400 | Weak transcription | Fetal Intestine Large | intestine |
| 19 | chr17:53525200-53526400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 20 | chr17:53525200-53527800 | Weak transcription | Liver | Liver |
| 21 | chr17:53525400-53526400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 22 | chr17:53525800-53526800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 23 | chr17:53525800-53527000 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 24 | chr17:53525800-53530800 | Enhancers | Placenta | Placenta |
| 25 | chr17:53525800-53531600 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 26 | chr17:53525800-53534600 | Enhancers | Hela-S3 | cervix |
| 27 | chr17:53526000-53526400 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 28 | chr17:53526000-53526600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 29 | chr17:53526000-53526600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 30 | chr17:53526000-53526600 | Enhancers | Colon Smooth Muscle | Colon |
| 31 | chr17:53526000-53526800 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 32 | chr17:53526000-53526800 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 33 | chr17:53526000-53526800 | Enhancers | Osteobl | bone |
| 34 | chr17:53526000-53527000 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 35 | chr17:53526000-53529400 | Enhancers | K562 | blood |
| 36 | chr17:53526000-53529600 | Enhancers | A549 | lung |
| 37 | chr17:53526000-53529800 | Enhancers | Fetal Lung | lung |
| 38 | chr17:53526000-53534400 | Enhancers | Adipose Nuclei | Adipose |
| 39 | chr17:53526200-53526400 | Enhancers | Fetal Intestine Small | intestine |
| 40 | chr17:53526200-53526400 | Enhancers | Fetal Kidney | kidney |
| 41 | chr17:53526200-53526400 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 42 | chr17:53526200-53526600 | Enhancers | NHLF | lung |
| 43 | chr17:53526200-53527000 | Enhancers | Fetal Stomach | stomach |
