Variant report
Variant | rs9921179 |
---|---|
Chromosome Location | chr16:34949513-34949514 |
allele | A/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11862087 | 0.86[EUR][1000 genomes] |
rs11862741 | 1.00[EUR][1000 genomes] |
rs11863543 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11864600 | 1.00[EUR][1000 genomes] |
rs11864850 | 0.86[EUR][1000 genomes] |
rs11864877 | 0.86[EUR][1000 genomes] |
rs11865286 | 0.86[EUR][1000 genomes] |
rs11865314 | 0.86[EUR][1000 genomes] |
rs11865764 | 0.86[EUR][1000 genomes] |
rs1304752 | 0.86[EUR][1000 genomes] |
rs13331101 | 0.86[EUR][1000 genomes] |
rs1501465 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs1532679 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs1583338 | 0.86[EUR][1000 genomes] |
rs17052041 | 0.86[EUR][1000 genomes] |
rs17052142 | 0.86[EUR][1000 genomes] |
rs17052144 | 0.86[EUR][1000 genomes] |
rs17052149 | 0.86[EUR][1000 genomes] |
rs17052150 | 0.86[EUR][1000 genomes] |
rs17052151 | 0.86[EUR][1000 genomes] |
rs17841538 | 0.86[EUR][1000 genomes] |
rs17841544 | 0.86[EUR][1000 genomes] |
rs17841547 | 0.84[AMR][1000 genomes] |
rs17841548 | 1.00[EUR][1000 genomes] |
rs17841551 | 1.00[EUR][1000 genomes] |
rs17841552 | 1.00[EUR][1000 genomes] |
rs17841553 | 1.00[EUR][1000 genomes] |
rs17841557 | 1.00[EUR][1000 genomes] |
rs17841560 | 1.00[EUR][1000 genomes] |
rs17841561 | 1.00[EUR][1000 genomes] |
rs17841567 | 0.86[EUR][1000 genomes] |
rs1994034 | 0.86[EUR][1000 genomes] |
rs2121877 | 0.86[EUR][1000 genomes] |
rs28368765 | 0.86[EUR][1000 genomes] |
rs28504660 | 0.86[EUR][1000 genomes] |
rs345553 | 0.82[AFR][1000 genomes];1.00[EUR][1000 genomes] |
rs41466646 | 0.86[EUR][1000 genomes] |
rs55855405 | 0.86[EUR][1000 genomes] |
rs55873270 | 0.86[EUR][1000 genomes] |
rs55947128 | 0.86[EUR][1000 genomes] |
rs55990867 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs56130601 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs56150069 | 1.00[EUR][1000 genomes] |
rs56151540 | 0.86[EUR][1000 genomes] |
rs56389464 | 0.86[EUR][1000 genomes] |
rs56789577 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs57748740 | 1.00[EUR][1000 genomes] |
rs58106048 | 0.86[EUR][1000 genomes] |
rs58227353 | 0.86[EUR][1000 genomes] |
rs58874752 | 0.86[EUR][1000 genomes] |
rs59208889 | 0.86[EUR][1000 genomes] |
rs59423657 | 0.86[EUR][1000 genomes] |
rs59902571 | 0.86[EUR][1000 genomes] |
rs59970187 | 1.00[EUR][1000 genomes] |
rs59987957 | 1.00[EUR][1000 genomes] |
rs60510786 | 0.86[EUR][1000 genomes] |
rs60628599 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs61263121 | 0.86[EUR][1000 genomes] |
rs61485382 | 0.86[EUR][1000 genomes] |
rs61649499 | 1.00[EUR][1000 genomes] |
rs6563877 | 0.86[EUR][1000 genomes] |
rs6563878 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs6563886 | 0.86[EUR][1000 genomes] |
rs7184469 | 0.86[EUR][1000 genomes] |
rs7184498 | 0.86[EUR][1000 genomes] |
rs7185642 | 0.86[EUR][1000 genomes] |
rs7186375 | 1.00[EUR][1000 genomes] |
rs7186948 | 0.86[EUR][1000 genomes] |
rs7187499 | 0.86[EUR][1000 genomes] |
rs7192596 | 1.00[EUR][1000 genomes] |
rs7194464 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7197316 | 1.00[EUR][1000 genomes] |
rs7197656 | 1.00[EUR][1000 genomes] |
rs7198853 | 1.00[EUR][1000 genomes] |
rs7198892 | 1.00[EUR][1000 genomes] |
rs7202195 | 1.00[EUR][1000 genomes] |
rs7204365 | 0.86[EUR][1000 genomes] |
rs74015953 | 0.86[EUR][1000 genomes] |
rs74015990 | 0.86[EUR][1000 genomes] |
rs74015992 | 1.00[EUR][1000 genomes] |
rs74015994 | 1.00[EUR][1000 genomes] |
rs74015995 | 0.86[EUR][1000 genomes] |
rs74015996 | 1.00[EUR][1000 genomes] |
rs74016117 | 0.86[EUR][1000 genomes] |
rs74016118 | 0.86[EUR][1000 genomes] |
rs74016119 | 0.86[EUR][1000 genomes] |
rs74016120 | 0.86[EUR][1000 genomes] |
rs74016123 | 0.86[EUR][1000 genomes] |
rs74016124 | 0.86[EUR][1000 genomes] |
rs74016127 | 0.86[EUR][1000 genomes] |
rs74016129 | 0.86[EUR][1000 genomes] |
rs74018403 | 1.00[EUR][1000 genomes] |
rs74018404 | 1.00[EUR][1000 genomes] |
rs74018407 | 1.00[EUR][1000 genomes] |
rs74018408 | 0.86[EUR][1000 genomes] |
rs74018409 | 1.00[EUR][1000 genomes] |
rs74018425 | 1.00[EUR][1000 genomes] |
rs74018431 | 1.00[EUR][1000 genomes] |
rs74018433 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs74018435 | 0.86[EUR][1000 genomes] |
rs74018436 | 0.86[EUR][1000 genomes] |
rs74018437 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs74018438 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs74018442 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs74018444 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs74018456 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs74018457 | 0.86[EUR][1000 genomes] |
rs74018458 | 0.86[EUR][1000 genomes] |
rs74018459 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs74018461 | 0.86[EUR][1000 genomes] |
rs74018462 | 0.86[EUR][1000 genomes] |
rs74018463 | 0.86[EUR][1000 genomes] |
rs74018464 | 0.86[EUR][1000 genomes] |
rs74018465 | 0.86[EUR][1000 genomes] |
rs74018469 | 0.86[EUR][1000 genomes] |
rs74018470 | 0.86[EUR][1000 genomes] |
rs74018471 | 0.86[EUR][1000 genomes] |
rs74018473 | 0.86[EUR][1000 genomes] |
rs74018477 | 0.86[EUR][1000 genomes] |
rs74018480 | 0.86[EUR][1000 genomes] |
rs74018481 | 0.86[EUR][1000 genomes] |
rs74018483 | 0.86[EUR][1000 genomes] |
rs74018489 | 0.86[EUR][1000 genomes] |
rs74018493 | 0.86[EUR][1000 genomes] |
rs7499906 | 0.86[EUR][1000 genomes] |
rs7500529 | 0.86[EUR][1000 genomes] |
rs8044470 | 0.86[EUR][1000 genomes] |
rs8045492 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs8045606 | 0.86[EUR][1000 genomes] |
rs8051145 | 0.86[EUR][1000 genomes] |
rs8051969 | 0.86[EUR][1000 genomes] |
rs8052760 | 0.86[EUR][1000 genomes] |
rs8053475 | 1.00[EUR][1000 genomes] |
rs8054064 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs8054608 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs8057388 | 1.00[EUR][1000 genomes] |
rs8058675 | 1.00[EUR][1000 genomes] |
rs8059170 | 1.00[EUR][1000 genomes] |
rs8059333 | 0.86[EUR][1000 genomes] |
rs8059400 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs8060716 | 0.86[EUR][1000 genomes] |
rs979576 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9932621 | 0.86[EUR][1000 genomes] |
rs9939409 | 0.86[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1067686 | chr16:34202088-35147508 | ZNF genes & repeats Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 83 gene(s) | inside rSNPs | diseases |
2 | nsv532260 | chr16:34202088-35147508 | Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 83 gene(s) | inside rSNPs | diseases |
3 | nsv521817 | chr16:34221454-35168832 | Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 81 gene(s) | inside rSNPs | diseases |
4 | nsv521994 | chr16:34221454-35168832 | Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 81 gene(s) | inside rSNPs | diseases |
5 | esv2757636 | chr16:34436185-35042935 | ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 60 gene(s) | inside rSNPs | diseases |
6 | esv34629 | chr16:34449700-35139485 | ZNF genes & repeats Enhancers Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 60 gene(s) | inside rSNPs | diseases |
7 | nsv431464 | chr16:34467499-35122095 | Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 58 gene(s) | inside rSNPs | diseases |
8 | esv34862 | chr16:34467540-35122095 | Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 58 gene(s) | inside rSNPs | diseases |
9 | nsv431488 | chr16:34467540-35139485 | Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 59 gene(s) | inside rSNPs | diseases |
10 | nsv1056617 | chr16:34543711-35283214 | ZNF genes & repeats Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 53 gene(s) | inside rSNPs | diseases |
11 | nsv572385 | chr16:34583626-35285582 | ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 51 gene(s) | inside rSNPs | diseases |
12 | nsv918222 | chr16:34739999-35076660 | Enhancers ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 32 gene(s) | inside rSNPs | diseases |
13 | nsv977088 | chr16:34789235-34989803 | Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 20 gene(s) | inside rSNPs | diseases |
14 | nsv457486 | chr16:34805859-35168832 | Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 26 gene(s) | inside rSNPs | diseases |
15 | nsv572387 | chr16:34805859-35168832 | Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 26 gene(s) | inside rSNPs | diseases |
16 | nsv9442 | chr16:34875828-35025992 | ZNF genes & repeats Enhancers Active TSS Weak transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 19 gene(s) | inside rSNPs | diseases |
17 | nsv1059363 | chr16:34935402-35283214 | Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 23 gene(s) | inside rSNPs | diseases |
18 | esv3415979 | chr16:34949301-34951149 | ZNF genes & repeats | n/a | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr16:34948800-34949800 | ZNF genes & repeats | Adipose Nuclei | Adipose |
2 | chr16:34949200-34949800 | ZNF genes & repeats | Brain Dorsolateral Prefrontal Cortex | brain |