Variant report
Variant | rs74018493 |
---|---|
Chromosome Location | chr16:35078720-35078721 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10521153 | 1.00[EUR][1000 genomes] |
rs11862087 | 1.00[EUR][1000 genomes] |
rs11863543 | 0.86[EUR][1000 genomes] |
rs11864796 | 1.00[EUR][1000 genomes] |
rs11864850 | 1.00[EUR][1000 genomes] |
rs11864877 | 1.00[EUR][1000 genomes] |
rs11865314 | 1.00[EUR][1000 genomes] |
rs11865764 | 1.00[EUR][1000 genomes] |
rs1304752 | 1.00[EUR][1000 genomes] |
rs1501465 | 0.86[EUR][1000 genomes] |
rs1532679 | 0.86[EUR][1000 genomes] |
rs1583338 | 1.00[EUR][1000 genomes] |
rs17052041 | 1.00[EUR][1000 genomes] |
rs17841538 | 1.00[EUR][1000 genomes] |
rs17841544 | 1.00[EUR][1000 genomes] |
rs17841548 | 0.86[EUR][1000 genomes] |
rs1994034 | 1.00[EUR][1000 genomes] |
rs2121877 | 1.00[EUR][1000 genomes] |
rs2219964 | 1.00[EUR][1000 genomes] |
rs41466646 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs55740740 | 1.00[EUR][1000 genomes] |
rs55855405 | 1.00[EUR][1000 genomes] |
rs55873270 | 1.00[EUR][1000 genomes] |
rs55990867 | 0.86[EUR][1000 genomes] |
rs56130601 | 0.86[EUR][1000 genomes] |
rs56150069 | 0.86[EUR][1000 genomes] |
rs56151540 | 1.00[EUR][1000 genomes] |
rs56244832 | 1.00[EUR][1000 genomes] |
rs56389464 | 1.00[EUR][1000 genomes] |
rs56789577 | 0.86[EUR][1000 genomes] |
rs57563212 | 1.00[EUR][1000 genomes] |
rs57937787 | 1.00[EUR][1000 genomes] |
rs58106048 | 1.00[EUR][1000 genomes] |
rs58140816 | 1.00[EUR][1000 genomes] |
rs59208889 | 1.00[EUR][1000 genomes] |
rs59423657 | 1.00[EUR][1000 genomes] |
rs59902571 | 1.00[EUR][1000 genomes] |
rs60510786 | 1.00[EUR][1000 genomes] |
rs60628599 | 0.86[EUR][1000 genomes] |
rs61263121 | 1.00[EUR][1000 genomes] |
rs61485382 | 1.00[EUR][1000 genomes] |
rs61649499 | 0.86[EUR][1000 genomes] |
rs6563877 | 1.00[EUR][1000 genomes] |
rs6563878 | 0.86[EUR][1000 genomes] |
rs6563886 | 1.00[EUR][1000 genomes] |
rs7184469 | 1.00[EUR][1000 genomes] |
rs7184498 | 1.00[EUR][1000 genomes] |
rs7186948 | 1.00[EUR][1000 genomes] |
rs7187499 | 1.00[EUR][1000 genomes] |
rs7194464 | 0.86[EUR][1000 genomes] |
rs7197730 | 0.86[EUR][1000 genomes] |
rs74016114 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs74016117 | 1.00[EUR][1000 genomes] |
rs74016118 | 1.00[EUR][1000 genomes] |
rs74016119 | 1.00[EUR][1000 genomes] |
rs74016120 | 1.00[EUR][1000 genomes] |
rs74016123 | 1.00[EUR][1000 genomes] |
rs74016124 | 1.00[EUR][1000 genomes] |
rs74016127 | 1.00[EUR][1000 genomes] |
rs74016129 | 1.00[EUR][1000 genomes] |
rs74016131 | 1.00[EUR][1000 genomes] |
rs74016132 | 1.00[EUR][1000 genomes] |
rs74016133 | 1.00[EUR][1000 genomes] |
rs74016134 | 1.00[EUR][1000 genomes] |
rs74016135 | 1.00[EUR][1000 genomes] |
rs74016138 | 1.00[EUR][1000 genomes] |
rs74016142 | 1.00[EUR][1000 genomes] |
rs74018425 | 0.86[EUR][1000 genomes] |
rs74018431 | 0.86[EUR][1000 genomes] |
rs74018433 | 0.86[EUR][1000 genomes] |
rs74018435 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs74018436 | 1.00[EUR][1000 genomes] |
rs74018437 | 0.86[EUR][1000 genomes] |
rs74018438 | 0.86[EUR][1000 genomes] |
rs74018442 | 0.86[EUR][1000 genomes] |
rs74018443 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs74018444 | 0.86[EUR][1000 genomes] |
rs74018445 | 0.86[EUR][1000 genomes] |
rs74018456 | 0.86[EUR][1000 genomes] |
rs74018457 | 1.00[EUR][1000 genomes] |
rs74018458 | 1.00[EUR][1000 genomes] |
rs74018459 | 0.86[EUR][1000 genomes] |
rs74018461 | 1.00[EUR][1000 genomes] |
rs74018462 | 1.00[EUR][1000 genomes] |
rs74018463 | 1.00[EUR][1000 genomes] |
rs74018464 | 1.00[EUR][1000 genomes] |
rs74018465 | 1.00[EUR][1000 genomes] |
rs74018468 | 0.86[EUR][1000 genomes] |
rs74018469 | 1.00[EUR][1000 genomes] |
rs74018470 | 1.00[EUR][1000 genomes] |
rs74018471 | 1.00[EUR][1000 genomes] |
rs74018473 | 1.00[EUR][1000 genomes] |
rs74018477 | 1.00[EUR][1000 genomes] |
rs74018480 | 1.00[EUR][1000 genomes] |
rs74018481 | 1.00[EUR][1000 genomes] |
rs74018483 | 1.00[EUR][1000 genomes] |
rs74018489 | 1.00[EUR][1000 genomes] |
rs7499906 | 1.00[EUR][1000 genomes] |
rs7500529 | 1.00[EUR][1000 genomes] |
rs8044124 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs8044470 | 1.00[EUR][1000 genomes] |
rs8045492 | 0.86[EUR][1000 genomes] |
rs8046677 | 0.86[EUR][1000 genomes] |
rs8051145 | 1.00[EUR][1000 genomes] |
rs8051969 | 1.00[EUR][1000 genomes] |
rs8052760 | 1.00[EUR][1000 genomes] |
rs8053475 | 0.86[EUR][1000 genomes] |
rs8054064 | 0.86[EUR][1000 genomes] |
rs8054608 | 0.86[EUR][1000 genomes] |
rs8058675 | 0.86[EUR][1000 genomes] |
rs8059170 | 0.86[EUR][1000 genomes] |
rs8059333 | 1.00[EUR][1000 genomes] |
rs8059400 | 0.86[EUR][1000 genomes] |
rs8060716 | 1.00[EUR][1000 genomes] |
rs8189642 | 1.00[EUR][1000 genomes] |
rs8189680 | 1.00[EUR][1000 genomes] |
rs979576 | 0.86[EUR][1000 genomes] |
rs9921179 | 0.86[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1067686 | chr16:34202088-35147508 | ZNF genes & repeats Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 83 gene(s) | inside rSNPs | diseases |
2 | nsv532260 | chr16:34202088-35147508 | Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 83 gene(s) | inside rSNPs | diseases |
3 | nsv521817 | chr16:34221454-35168832 | Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 81 gene(s) | inside rSNPs | diseases |
4 | nsv521994 | chr16:34221454-35168832 | Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 81 gene(s) | inside rSNPs | diseases |
5 | esv34629 | chr16:34449700-35139485 | ZNF genes & repeats Enhancers Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 60 gene(s) | inside rSNPs | diseases |
6 | nsv431464 | chr16:34467499-35122095 | Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 58 gene(s) | inside rSNPs | diseases |
7 | esv34862 | chr16:34467540-35122095 | Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 58 gene(s) | inside rSNPs | diseases |
8 | nsv431488 | chr16:34467540-35139485 | Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 59 gene(s) | inside rSNPs | diseases |
9 | nsv1056617 | chr16:34543711-35283214 | ZNF genes & repeats Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 53 gene(s) | inside rSNPs | diseases |
10 | nsv572385 | chr16:34583626-35285582 | ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 51 gene(s) | inside rSNPs | diseases |
11 | nsv457486 | chr16:34805859-35168832 | Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 26 gene(s) | inside rSNPs | diseases |
12 | nsv572387 | chr16:34805859-35168832 | Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 26 gene(s) | inside rSNPs | diseases |
13 | nsv1059363 | chr16:34935402-35283214 | Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 23 gene(s) | inside rSNPs | diseases |
14 | nsv1057154 | chr16:34956840-35147509 | ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 23 gene(s) | inside rSNPs | diseases |
15 | nsv542907 | chr16:34956840-35147509 | Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 23 gene(s) | inside rSNPs | diseases |
16 | nsv977089 | chr16:35039150-35097927 | ZNF genes & repeats Enhancers Weak transcription | TF binding regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr16:35078200-35079800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |