Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:103326182..103328296-chr7:103329519..103331647,2	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10245257	1.00[JPT][hapmap]
rs10247439	0.94[CHB][hapmap];0.93[CHD][hapmap];0.94[JPT][hapmap];0.93[ASN][1000 genomes]
rs123712	0.94[JPT][hapmap]
rs123714	0.94[JPT][hapmap]
rs12705138	0.81[CEU][hapmap];0.83[EUR][1000 genomes]
rs13223067	0.82[EUR][1000 genomes]
rs2109697	0.94[JPT][hapmap]
rs2191702	1.00[JPT][hapmap]
rs2237631	0.82[CEU][hapmap];0.82[MEX][hapmap]
rs2249372	0.94[JPT][hapmap]
rs2299357	0.84[CEU][hapmap];0.82[EUR][1000 genomes]
rs2299366	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs362642	0.94[JPT][hapmap]
rs362644	1.00[JPT][hapmap]
rs362695	0.94[JPT][hapmap]
rs3808024	0.94[JPT][hapmap]
rs496907	0.96[CHD][hapmap];0.82[GIH][hapmap];0.83[JPT][hapmap];0.91[ASN][1000 genomes]
rs634500	0.81[CEU][hapmap]
rs635245	0.80[CEU][hapmap]
rs649310	0.81[CEU][hapmap]
rs722613	0.96[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv491911	chr7:102967150-103403622	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv831085	chr7:103140672-103342388	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv427799	chr7:103250733-103454202	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	esv1835816	chr7:103255144-103354223	Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103326000-103331600	Enhancers	Brain Germinal Matrix	brain
2	chr7:103329600-103331400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr7:103329800-103331200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr7:103329800-103331200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr7:103330200-103331600	Weak transcription	HepG2	liver
6	chr7:103330800-103331200	Enhancers	K562	blood

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