Variant report

Variant	rs9961540
Chromosome Location	chr18:45151704-45151705
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10502886	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16956000	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28444636	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56330224	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57391572	0.81[AFR][1000 genomes]
rs7227134	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7242884	0.93[YRI][hapmap]
rs7244405	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73953281	0.87[AFR][1000 genomes]
rs8088535	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9945915	0.93[AFR][1000 genomes]
rs9946150	0.88[AFR][1000 genomes]
rs9948880	0.88[AFR][1000 genomes]
rs9956762	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9961544	1.00[YRI][hapmap]
rs9963571	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv978576	chr18:45144728-45152265	Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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