Variant report

Variant rs9968098
Chromosome Location chr3:28394357-28394358
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:28391000-28394400 Weak transcription Spleen Spleen
2 chr3:28391200-28395200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr3:28391400-28394400 Weak transcription Placenta Placenta
4 chr3:28391400-28394400 Weak transcription Fetal Stomach stomach
5 chr3:28391400-28395200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr3:28391400-28395200 Weak transcription Brain Cingulate Gyrus brain
7 chr3:28391400-28396000 Weak transcription Colonic Mucosa Colon
8 chr3:28391600-28394600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr3:28391600-28395400 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr3:28391600-28395400 Weak transcription Brain Hippocampus Middle brain
11 chr3:28391600-28397800 Weak transcription Stomach Smooth Muscle stomach
12 chr3:28391600-28398600 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr3:28391800-28395000 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr3:28391800-28395200 Weak transcription Rectal Smooth Muscle rectum
15 chr3:28391800-28395200 Weak transcription Osteobl bone
16 chr3:28391800-28395400 Weak transcription Brain Angular Gyrus brain
17 chr3:28391800-28395600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr3:28391800-28397000 Weak transcription HSMMtube muscle
19 chr3:28392000-28395000 Weak transcription NHDF-Ad bronchial
20 chr3:28392000-28397200 Weak transcription Muscle Satellite Cultured Cells --
21 chr3:28392200-28394800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr3:28392200-28395400 Weak transcription Brain Anterior Caudate brain
23 chr3:28392200-28395800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr3:28392400-28394800 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr3:28392400-28395000 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr3:28392400-28395400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr3:28392600-28395400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr3:28392800-28395600 ZNF genes & repeats Fetal Lung lung
29 chr3:28392800-28395800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr3:28392800-28395800 ZNF genes & repeats Primary hematopoietic stem cells blood
31 chr3:28392800-28395800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
32 chr3:28393000-28395000 Weak transcription Psoas Muscle Psoas
33 chr3:28393000-28395400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr3:28393000-28395800 Weak transcription Dnd41 blood
35 chr3:28393200-28395000 ZNF genes & repeats Ovary ovary
36 chr3:28393200-28395600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
37 chr3:28393200-28395600 ZNF genes & repeats Primary B cells from cord blood blood
38 chr3:28393200-28395600 ZNF genes & repeats Primary B cells from peripheral blood blood
39 chr3:28393200-28395600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
40 chr3:28393200-28395800 ZNF genes & repeats Liver Liver
41 chr3:28393200-28395800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
42 chr3:28393400-28395400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr3:28393400-28395600 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
44 chr3:28393600-28394400 ZNF genes & repeats Colon Smooth Muscle Colon
45 chr3:28393800-28395600 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr3:28393800-28395600 ZNF genes & repeats Fetal Muscle Trunk muscle
47 chr3:28393800-28412200 Weak transcription Pancreas Pancrea
48 chr3:28394000-28394400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr3:28394000-28395000 Weak transcription HSMM muscle
50 chr3:28394000-28395200 Weak transcription Duodenum Smooth Muscle Duodenum

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