The 2.0 version of rSNPBase

Variant report

Variant rs9969025
Chromosome Location chr6:109460620-109460621
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:109417800-109461800 Weak transcription Fetal Stomach stomach
2 chr6:109418200-109463200 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr6:109440400-109494000 Weak transcription Fetal Kidney kidney
4 chr6:109440800-109478000 Weak transcription Brain Substantia Nigra brain
5 chr6:109442400-109461800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr6:109442400-109461800 Weak transcription Fetal Intestine Large intestine
7 chr6:109442400-109463000 Weak transcription Dnd41 blood
8 chr6:109442400-109486800 Weak transcription Ovary ovary
9 chr6:109442400-109487200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr6:109442400-109488800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr6:109442600-109462400 Weak transcription HSMM muscle
12 chr6:109442600-109463400 Weak transcription Aorta Aorta
13 chr6:109442600-109468000 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr6:109442600-109471200 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr6:109442600-109488400 Weak transcription Primary B cells from cord blood blood
16 chr6:109442800-109483800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr6:109443000-109461600 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr6:109443000-109462600 Weak transcription NHDF-Ad bronchial
19 chr6:109443000-109475400 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr6:109443000-109486400 Weak transcription K562 blood
21 chr6:109443200-109471200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr6:109443600-109461800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr6:109443600-109462400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr6:109443600-109463400 Weak transcription Fetal Lung lung
25 chr6:109443600-109471200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr6:109443600-109484000 Weak transcription Rectal Smooth Muscle rectum
27 chr6:109444200-109463400 Weak transcription Liver Liver
28 chr6:109444800-109475400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr6:109444800-109482200 Weak transcription Left Ventricle heart
30 chr6:109448200-109474200 Weak transcription Thymus Thymus
31 chr6:109448400-109472000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr6:109451400-109472000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr6:109451600-109488000 Weak transcription Brain Germinal Matrix brain
34 chr6:109452200-109463000 Weak transcription Primary hematopoietic stem cells blood
35 chr6:109452400-109487200 Weak transcription Stomach Smooth Muscle stomach
36 chr6:109452600-109486800 Weak transcription Esophagus oesophagus
37 chr6:109452800-109461600 Weak transcription Fetal Muscle Leg muscle
38 chr6:109452800-109463200 Weak transcription Fetal Intestine Small intestine
39 chr6:109453000-109482000 Weak transcription Right Ventricle heart
40 chr6:109453200-109461400 Weak transcription Pancreas Pancrea
41 chr6:109453200-109493400 Weak transcription Gastric stomach
42 chr6:109454400-109471200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr6:109454600-109463000 Weak transcription Fetal Muscle Trunk muscle
44 chr6:109454800-109472000 Weak transcription Fetal Brain Female brain
45 chr6:109459400-109468000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr6:109460000-109461000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr6:109460200-109460800 Enhancers Muscle Satellite Cultured Cells --
48 chr6:109460200-109460800 Enhancers HepG2 liver
49 chr6:109460200-109460800 Enhancers HUVEC blood vessel
50 chr6:109460200-109462400 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015