Variant report

Variant	rs9985361
Chromosome Location	chr3:42715601-42715602
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10154957	0.81[AFR][1000 genomes]
rs13325536	0.81[AFR][1000 genomes]
rs28830825	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58273990	0.81[AFR][1000 genomes]
rs9311325	1.00[YRI][hapmap]
rs9816776	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9822273	0.81[AFR][1000 genomes]
rs9844154	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9853946	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1002944	chr3:42559762-42728909	Strong transcription Flanking Active TSS Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:42715200-42716000	Enhancers	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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