No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs143786017 |
chr15:57999127-57999128 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs147329990 |
chr15:57999141-57999142 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs140993323 |
chr15:57999150-57999151 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs376028082 |
chr15:57999163-57999164 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs140115125 |
chr15:57999164-57999165 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs542005107 |
chr15:57999168-57999169 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs374928862 |
chr15:57999192-57999193 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs557123562 |
chr15:57999193-57999194 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs114392733 |
chr15:57999197-57999198 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs546122446 |
chr15:57999204-57999205 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs372765766 |
chr15:57999227-57999228 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs565182386 |
chr15:57999285-57999286 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs113716246 |
chr15:57999302-57999303 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs11858659 |
chr15:57999304-57999305 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
15 |
rs541437398 |
chr15:57999339-57999340 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs113169869 |
chr15:57999379-57999380 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs561416693 |
chr15:57999380-57999381 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs530632374 |
chr15:57999389-57999390 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs150284835 |
chr15:57999401-57999402 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs192742731 |
chr15:57999402-57999403 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs532691401 |
chr15:57999403-57999404 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs552932195 |
chr15:57999404-57999405 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs566064752 |
chr15:57999444-57999445 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs11854253 |
chr15:57999475-57999476 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
25 |
rs182506077 |
chr15:57999502-57999503 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs568432629 |
chr15:57999517-57999518 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs137987577 |
chr15:57999588-57999589 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs149494746 |
chr15:57999628-57999629 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs189163583 |
chr15:57999638-57999639 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs539342022 |
chr15:57999651-57999652 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs28412380 |
chr15:57999655-57999656 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs552810091 |
chr15:57999700-57999701 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs572806088 |
chr15:57999734-57999735 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs193092616 |
chr15:57999751-57999752 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs138857438 |
chr15:57999753-57999754 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs546935057 |
chr15:57999761-57999762 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs142797799 |
chr15:57999796-57999797 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs544322494 |
chr15:57999797-57999798 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs370540553 |
chr15:57999821-57999822 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs567155691 |
chr15:57999831-57999832 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs535818313 |
chr15:57999856-57999857 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs184476572 |
chr15:57999879-57999880 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs546427776 |
chr15:57999955-57999956 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs187404135 |
chr15:58000013-58000014 |
Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs555986041 |
chr15:58000025-58000026 |
Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs11638075 |
chr15:58000142-58000143 |
Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
47 |
rs537122080 |
chr15:58000147-58000148 |
Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs537196225 |
chr15:58000156-58000157 |
Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs544879227 |
chr15:58000172-58000173 |
Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs556927787 |
chr15:58000209-58000210 |
Flanking Active TSS Active TSS Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|