Variant report

Variant	nsv543996
Chromosome Location	chr19:36210269-36265431
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3611)
CpG islands
(count:5131)
Chromatin interactive
region (count:92)
LncRNA
region (count:65)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3611 , 50 per page) page: 1 2 3 4 5 6 7 ... 73

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:36248751-36249135	K562	blood:	n/a	n/a
2	ARID3A	chr19:36231370-36232278	HepG2	liver:	n/a	n/a
3	ARID3A	chr19:36230904-36231016	K562	blood:	n/a	n/a
4	ARID3A	chr19:36248961-36249462	HepG2	liver:	n/a	n/a
5	ARID3A	chr19:36239077-36239686	K562	blood:	n/a	n/a
6	ARID3A	chr19:36231909-36232068	K562	blood:	n/a	n/a
7	ARID3A	chr19:36235921-36236119	HepG2	liver:	n/a	n/a
8	ARID3A	chr19:36235807-36236692	K562	blood:	n/a	n/a
9	ATF1	chr19:36239075-36239572	K562	blood:	n/a	n/a
10	ATF1	chr19:36231337-36231801	K562	blood:	n/a	n/a
11	ATF1	chr19:36235703-36236645	K562	blood:	n/a	n/a
12	ATF1	chr19:36248703-36249119	K562	blood:	n/a	n/a
13	ATF2	chr19:36231482-36232101	GM12878	blood:	n/a	n/a
14	ATF2	chr19:36236126-36236716	GM12878	blood:	n/a	chr19:36236322-36236333
15	ATF2	chr19:36235518-36236039	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr19:36236187-36236560	GM12878	blood:	n/a	chr19:36236322-36236333
17	ATF2	chr19:36249154-36249506	GM12878	blood:	n/a	n/a
18	ATF2	chr19:36233014-36233622	GM12878	blood:	n/a	n/a
19	ATF2	chr19:36238983-36239554	GM12878	blood:	n/a	n/a
20	ATF2	chr19:36236152-36236678	H1-hESC	embryonic stem cell:	n/a	chr19:36236322-36236333
21	ATF2	chr19:36231631-36231984	GM12878	blood:	n/a	n/a
22	ATF2	chr19:36248707-36249312	GM12878	blood:	n/a	n/a
23	ATF2	chr19:36232924-36233606	GM12878	blood:	n/a	n/a
24	ATF2	chr19:36236007-36236610	H1-hESC	embryonic stem cell:	n/a	chr19:36236322-36236333
25	ATF3	chr19:36248653-36249536	A549	lung:	n/a	chr19:36248689-36248697 chr19:36249002-36249011
26	ATF3	chr19:36236003-36236764	A549	lung:	n/a	chr19:36236324-36236332 chr19:36236429-36236438
27	ATF3	chr19:36239096-36239378	K562	blood:	n/a	n/a
28	ATF3	chr19:36238804-36239979	A549	lung:	n/a	chr19:36239670-36239680
29	ATF3	chr19:36231160-36231977	A549	lung:	n/a	n/a
30	ATF3	chr19:36236179-36236575	K562	blood:	n/a	chr19:36236324-36236332 chr19:36236429-36236438
31	ATF3	chr19:36248243-36248551	K562	blood:	n/a	n/a
32	ATF3	chr19:36236202-36236484	K562	blood:	n/a	chr19:36236324-36236332 chr19:36236429-36236438
33	ATF3	chr19:36231172-36231991	A549	lung:	n/a	n/a
34	ATF3	chr19:36235508-36236824	A549	lung:	n/a	chr19:36236324-36236332 chr19:36236429-36236438
35	BACH1	chr19:36247024-36247390	H1-hESC	embryonic stem cell:	n/a	n/a
36	BACH1	chr19:36249169-36249369	K562	blood:	n/a	n/a
37	BACH1	chr19:36236308-36236563	H1-hESC	embryonic stem cell:	n/a	n/a
38	BACH1	chr19:36246283-36246801	H1-hESC	embryonic stem cell:	n/a	n/a
39	BACH1	chr19:36231186-36232152	H1-hESC	embryonic stem cell:	n/a	n/a
40	BACH1	chr19:36231198-36231391	K562	blood:	n/a	n/a
41	BACH1	chr19:36258950-36259256	H1-hESC	embryonic stem cell:	n/a	n/a
42	BACH1	chr19:36239341-36239900	H1-hESC	embryonic stem cell:	n/a	n/a
43	BATF	chr19:36233174-36233546	GM12878	blood:	n/a	n/a
44	BCL11A	chr19:36233170-36233550	GM12878	blood:	n/a	n/a
45	BCL11A	chr19:36233108-36233605	GM12878	blood:	n/a	n/a
46	BCL3	chr19:36229694-36232367	A549	lung:	n/a	chr19:36231101-36231108 chr19:36232113-36232121
47	BCL3	chr19:36229562-36231952	A549	lung:	n/a	chr19:36231101-36231108
48	BCL3	chr19:36235161-36237015	A549	lung:	n/a	chr19:36236330-36236339
49	BCL3	chr19:36228607-36229528	A549	lung:	n/a	n/a
50	BCL3	chr19:36238735-36240388	A549	lung:	n/a	chr19:36240281-36240290 chr19:36239253-36239261

(count:5131 , 50 per page) page: 1 2 3 4 5 6 7 ... 103

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:36248907-36248957	GM19239	blood:	n/a
2	chr19:36239198-36239248	Caco-2	colon:	n/a
3	chr19:36236382-36236432	T-47D	breast:	n/a
4	chr19:36216711-36216761	AG10803	skin:	n/a
5	chr19:36239198-36239248	HCT-116	colon:	n/a
6	chr19:36243162-36243212	HMEC	breast:	n/a
7	chr19:36210811-36210861	SK-N-SH_RA	brain:	n/a
8	chr19:36248907-36248957	GM19239	blood:	n/a
9	chr19:36239198-36239248	Caco-2	colon:	n/a
10	chr19:36236382-36236432	T-47D	breast:	n/a
11	chr19:36216711-36216761	AG10803	skin:	n/a
12	chr19:36239198-36239248	HCT-116	colon:	n/a
13	chr19:36243162-36243212	HMEC	breast:	n/a
14	chr19:36210811-36210861	SK-N-SH_RA	brain:	n/a
15	chr19:36214806-36214856	RPTEC	kidney:	n/a
16	chr19:36235836-36235886	HMEC	breast:	n/a
17	chr19:36236844-36236894	GM12892	blood:	n/a
18	chr19:36236539-36236589	BJ	skin:	n/a
19	chr19:36233447-36233497	LNCaP	prostate:	n/a
20	chr19:36247869-36247919	HRE	kidney:	n/a
21	chr19:36214912-36214962	AG09309	skin:	n/a
22	chr19:36249990-36250040	K562	blood:	n/a
23	chr19:36236496-36236546	HRCEpiC	kidney:	n/a
24	chr19:36248852-36248902	SK-N-SH_RA	brain:	n/a
25	chr19:36248877-36248927	SAEC	small airway:	n/a
26	chr19:36248877-36248927	HNPCEpiC	eye:	n/a
27	chr19:36210688-36210738	AG10803	skin:	n/a
28	chr19:36231948-36231998	MCF-7	breast:	n/a
29	chr19:36232218-36232268	HCPEpiC	choroid plexus:	n/a
30	chr19:36248980-36249030	BJ	skin:	n/a
31	chr19:36233447-36233497	AG04449	skin:	fetal
32	chr19:36249454-36249504	GM12891	blood:	n/a
33	chr19:36235836-36235886	GM12891	blood:	n/a
34	chr19:36246395-36246445	SK-N-MC	brain:	n/a
35	chr19:36243162-36243212	HCPEpiC	choroid plexus:	n/a
36	chr19:36236454-36236504	IMR90	lung:	fetal
37	chr19:36239198-36239248	HL-60	blood:	n/a
38	chr19:36235836-36235886	Jurkat	blood:	n/a
39	chr19:36249990-36250040	HEK293	kidney:	embryo
40	chr19:36236547-36236597	H1-hESC	embryonic stem cell:	embryo
41	chr19:36246408-36246458	K562	blood:	n/a
42	chr19:36247867-36247917	SK-N-SH	brain:	n/a
43	chr19:36247523-36247573	HIPEpiC	eye:	n/a
44	chr19:36247867-36247917	HMEC	breast:	n/a
45	chr19:36248020-36248070	ECC-1	luminal epithelium:	n/a
46	chr19:36237863-36237913	Caco-2	colon:	n/a
47	chr19:36229141-36229191	HEEpiC	esophagus:	n/a
48	chr19:36210913-36210963	HRPEpiC	eye:	n/a
49	chr19:36236539-36236589	HRE	kidney:	n/a
50	chr19:36235184-36235234	PFSK-1	brain:	n/a

(count:92 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr19:36205476..36213390-chr19:36226310..36233646,27	MCF-7	breast:
2	chr19:36203511..36205032-chr19:36208383..36210782,2	MCF-7	breast:
3	chr19:36034766..36037168-chr19:36234979..36237516,2	MCF-7	breast:
4	chr19:36136475..36140054-chr19:36207952..36210367,3	MCF-7	breast:
5	chr19:36256506..36259052-chr19:36263218..36265757,2	K562	blood:
6	chr19:36220754..36223608-chr19:36241225..36243043,2	MCF-7	breast:
7	chr19:36249138..36251092-chr19:36255483..36258452,2	MCF-7	breast:
8	chr19:36247584..36253409-chr19:36264102..36268750,7	K562	blood:
9	chr19:36261311..36264277-chr19:36264706..36266602,2	MCF-7	breast:
10	chr19:36206099..36210841-chr19:36246614..36251827,8	MCF-7	breast:
11	chr19:36247584..36253409-chr19:36264102..36268750,7	K562	blood:
12	chr19:36238866..36244880-chr19:36246037..36252437,21	MCF-7	breast:
13	chr19:36205476..36213390-chr19:36226310..36233646,27	MCF-7	breast:
14	chr19:36237682..36239540-chr19:36335176..36337549,2	MCF-7	breast:
15	chr19:36255893..36262036-chr19:36262850..36268803,8	MCF-7	breast:
16	chr19:36255893..36262036-chr19:36262850..36268803,8	MCF-7	breast:
17	chr19:36239350..36241235-chr19:36263074..36266129,3	MCF-7	breast:
18	chr19:36235922..36238148-chr19:36359346..36361404,2	MCF-7	breast:
19	chr19:36239375..36241509-chr19:36425781..36428099,2	MCF-7	breast:
20	chr19:36231491..36233720-chr19:36248400..36250494,2	MCF-7	breast:
21	chr19:36248580..36254743-chr19:36274692..36280659,6	K562	blood:
22	chr19:36208210..36211144-chr19:36264877..36267691,4	MCF-7	breast:
23	chr19:36208210..36211144-chr19:36264877..36267691,4	MCF-7	breast:
24	chr19:36239415..36241356-chr19:36242820..36244877,2	MCF-7	breast:
25	chr19:36245255..36250047-chr19:36263979..36267864,8	K562	blood:
26	chr19:36234776..36236564-chr19:36265019..36266986,2	K562	blood:
27	chr19:36247404..36252021-chr19:36265348..36272678,7	MCF-7	breast:
28	chr19:36220761..36223012-chr19:36264330..36266140,2	MCF-7	breast:
29	chr11:64037188..64037741-chr19:36248285..36249182,2	NB4	blood:
30	chr19:36215471..36217894-chr19:36227997..36233211,6	MCF-7	breast:
31	chr19:36247404..36252021-chr19:36265348..36272678,7	MCF-7	breast:
32	chr19:36249010..36249702-chr19:49121978..49122478,2	Hela-S3	cervix:
33	chr19:36223134..36225733-chr19:36234939..36237543,2	MCF-7	breast:
34	chr19:36229002..36231040-chr19:36266877..36269774,2	MCF-7	breast:
35	chr19:36256506..36259052-chr19:36262546..36265793,4	K562	blood:
36	chr19:36133481..36135868-chr19:36206189..36210381,3	K562	blood:
37	chr19:36207151..36210695-chr19:36264649..36268718,5	K562	blood:
38	chr19:36207787..36211113-chr19:36265053..36268029,3	K562	blood:
39	chr19:36208921..36210608-chr19:36499552..36501350,2	MCF-7	breast:
40	chr19:36248761..36250845-chr19:36272724..36275459,2	MCF-7	breast:
41	chr11:64545307..64546190-chr19:36235841..36236593,2	Hela-S3	cervix:
42	chr19:36251835..36255945-chr19:36256071..36258525,4	K562	blood:
43	chr19:36207379..36214815-chr19:36234227..36241330,25	MCF-7	breast:
44	chr19:36234776..36236564-chr19:36265019..36266986,2	K562	blood:
45	chr19:36035683..36038067-chr19:36234353..36237102,3	K562	blood:
46	chr19:36208378..36210285-chr19:36358548..36361708,3	K562	blood:
47	chr19:36241397..36243001-chr19:36264717..36266328,2	MCF-7	breast:
48	chr16:28564909..28565793-chr19:36235985..36236487,2	Hela-S3	cervix:
49	chr19:36239350..36241235-chr19:36263074..36266129,3	MCF-7	breast:
50	chr19:36245255..36250047-chr19:36263979..36267864,8	K562	blood:

(count:65 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-U2AF1L4-1	chr19:36234971-36235046	NR_110173
2	lnc-U2AF1L4-1	chr19:36233428-36233704	NR_110172
3	lnc-C19orf55-1	chr19:36259667-36260237	NONHSAT065916
4	lnc-U2AF1L4-3	chr19:36231281-36231450	NONHSAT065896
5	lnc-U2AF1L4-1	chr19:36235527-36235639	NR_110171
6	lnc-U2AF1L4-1	chr19:36234056-36234246	NR_110171
7	lnc-U2AF1L4-1	chr19:36236249-36236303	NONHSAT065900
8	lnc-U2AF1L4-1	chr19:36234971-36236113	NONHSAT065902
9	lnc-U2AF1L4-1	chr19:36234971-36235322	NONHSAT065899
10	lnc-U2AF1L4-1	chr19:36233433-36233704	NONHSAT065901
11	lnc-C19orf55-1	chr19:36259104-36259471	NONHSAT065915
12	lnc-U2AF1L4-1	chr19:36234710-36234805	NONHSAT065900
13	lnc-U2AF1L4-1	chr19:36236026-36236088	NONHSAT065901
14	lnc-C19orf55-1	chr19:36259667-36260155	NONHSAT065915
15	lnc-U2AF1L4-1	chr19:36236249-36236327	NONHSAT065901
16	lnc-U2AF1L4-1	chr19:36236026-36236254	NONHSAT065904
17	lnc-HSPB6-2	chr19:36245427-36246208	NONHSAT065911
18	lnc-U2AF1L4-1	chr19:36236249-36236315	NONHSAT065902
19	lnc-U2AF1L4-1	chr19:36235696-36235882	NONHSAT065904
20	lnc-U2AF1L4-1	chr19:36233434-36234805	NONHSAT065902
21	lnc-U2AF1L4-2	chr19:36231641-36232124	NONHSAT065898
22	lnc-HSPB6-1	chr19:36238146-36238382	ENSG00000247203
23	lnc-U2AF1L4-3	chr19:36231281-36231497	NONHSAT065897
24	lnc-U2AF1L4-1	chr19:36234971-36235322	NONHSAT065901
25	lnc-U2AF1L4-1	chr19:36235224-36235322	NR_110173
26	lnc-U2AF1L4-1	chr19:36234710-36234805	NONHSAT065901
27	lnc-U2AF1L4-3	chr19:36230429-36230527	NONHSAT065896
28	lnc-U2AF1L4-3	chr19:36230725-36230989	NONHSAT065897
29	lnc-U2AF1L4-3	chr19:36230611-36230670	NONHSAT065896
30	lnc-U2AF1L4-1	chr19:36235527-36235639	NR_110172
31	lnc-U2AF1L4-2	chr19:36233297-36233350	NONHSAT065898
32	lnc-HSPB6-3	chr19:36260046-36260194	ENSG00000267049.1
33	lnc-U2AF1L4-1	chr19:36236249-36236343	NR_110173
34	lnc-HSPB6-1	chr19:36242862-36244316	ENSG00000267439.1
35	lnc-HSPB6-3	chr19:36261653-36261930	ENSG00000267049.1
36	lnc-C19orf55-1	chr19:36259312-36259471	NONHSAT065916
37	lnc-HSPB6-1	chr19:36239030-36239189	ENSG00000267439.1
38	lnc-U2AF1L4-1	chr19:36234971-36236113	NONHSAT065900
39	lnc-U2AF1L4-1	chr19:36235224-36235322	NR_110171
40	lnc-U2AF1L4-1	chr19:36234971-36235322	NR_110172
41	lnc-LIN37-3	chr19:36246038-36246391	ENSG00000267328.1
42	lnc-U2AF1L4-1	chr19:36236249-36236343	NR_110172
43	lnc-LIN37-3	chr19:36245467-36245772	ENSG00000267328.1
44	lnc-LIN37-2	chr19:36239468-36239659	NONHSAT065909
45	lnc-U2AF1L4-1	chr19:36233428-36233704	NR_110173
46	lnc-U2AF1L4-1	chr19:36233433-36234106	NONHSAT065900
47	lnc-U2AF1L4-1	chr19:36235527-36235561	NONHSAT065899
48	lnc-C19orf55-1	chr19:36261714-36261930	NONHSAT065915
49	lnc-U2AF1L4-1	chr19:36233428-36233704	NR_110171
50	lnc-U2AF1L4-1	chr19:36234710-36234805	NR_110172

No data

Variant related genes	Relation type
C19orf55	TF binding region
HSPB6	TF binding region
KMT2B	TF binding region
PSENEN	TF binding region
ENSG00000267049	TF binding region
ENSG00000267328	TF binding region
ENSG00000267439	TF binding region
LIN37	TF binding region
U2AF1L4	TF binding region
ARHGAP33	TF binding region
ENSG00000267120	TF binding region
ENSG00000188223	TF binding region
IGFLR1	TF binding region
C19orf55	CpG island
HSPB6	CpG island
KMT2B	CpG island
PSENEN	CpG island
ENSG00000267049	CpG island
ENSG00000267328	CpG island
ENSG00000267439	CpG island
LIN37	CpG island
U2AF1L4	CpG island
ARHGAP33	CpG island
ENSG00000267120	CpG island
ENSG00000188223	CpG island
IGFLR1	CpG island
ENSG00000004776	chromatin interactions
ENSG00000004777	chromatin interactions
ENSG00000105699	chromatin interactions
ENSG00000105663	chromatin interactions
ENSG00000126254	chromatin interactions
ENSG00000105677	chromatin interactions
ENSG00000176476	chromatin interactions
ENSG00000011590	chromatin interactions
ENSG00000188223	chromatin interactions
ENSG00000236144	chromatin interactions
ENSG00000161265	chromatin interactions
ENSG00000260170	chromatin interactions
ENSG00000167604	chromatin interactions
ENSG00000104164	chromatin interactions
ENSG00000267439	chromatin interactions
ENSG00000126243	chromatin interactions
ENSG00000105672	chromatin interactions
ENSG00000205155	chromatin interactions
ENSG00000063177	chromatin interactions
ENSG00000272333	chromatin interactions
ENSG00000181392	chromatin interactions
ENSG00000113368	chromatin interactions
ENSG00000105698	chromatin interactions
ENSG00000089327	chromatin interactions
ENSG00000088854	chromatin interactions
ENSG00000267796	chromatin interactions
ENSG00000167595	chromatin interactions
ENSG00000161270	chromatin interactions
ENSG00000267049	chromatin interactions
ENSG00000126246	chromatin interactions
ENSG00000126267	chromatin interactions
ENSG00000267328	chromatin interactions
ENSG00000173264	chromatin interactions
ENSG00000105290	chromatin interactions
ENSG00000267120	chromatin interactions
ENSG00000168066	chromatin interactions
CDC42	miRNA target sites
BACE1	miRNA target sites

Extended variants
information (count: 2715 )
Associated
traits (count: 62 )

Variant overlapped rSNPs/rCNVs (count:2715 , 50 per page) page: 1 2 3 4 5 6 7 ... 55

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs372794277	chr19:36210326-36210327	Weak transcription Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a
2	rs138399600	chr19:36210355-36210356	Weak transcription Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
3	rs368991351	chr19:36210361-36210362	Weak transcription Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
4	rs202048028	chr19:36210405-36210406	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
5	rs567944243	chr19:36210419-36210420	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
6	rs536497393	chr19:36210453-36210454	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
7	rs553620514	chr19:36210456-36210457	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
8	rs376868853	chr19:36210468-36210469	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
9	rs371206299	chr19:36210473-36210474	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
10	rs374062390	chr19:36210475-36210476	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
11	rs377578602	chr19:36210501-36210502	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
12	rs544931926	chr19:36210507-36210508	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
13	rs117223260	chr19:36210522-36210523	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
14	rs375750072	chr19:36210543-36210544	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
15	rs559080956	chr19:36210564-36210565	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
16	rs539561996	chr19:36210573-36210574	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
17	rs575592619	chr19:36210578-36210579	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
18	rs544593098	chr19:36210583-36210584	Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
19	rs141335623	chr19:36210621-36210622	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
20	rs114140622	chr19:36210627-36210628	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
21	rs370760598	chr19:36210644-36210645	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
22	rs375157251	chr19:36210665-36210666	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
23	rs200918556	chr19:36210703-36210704	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
24	rs186326571	chr19:36210708-36210709	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
25	rs201092669	chr19:36210722-36210723	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
26	rs370168284	chr19:36210737-36210738	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
27	rs375544683	chr19:36210743-36210744	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
28	rs368578549	chr19:36210752-36210753	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
29	rs532152042	chr19:36210763-36210764	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
30	rs60207923	chr19:36210764-36210765	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
31	rs375244657	chr19:36210768-36210769	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
32	rs199974997	chr19:36210783-36210784	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
33	rs368286257	chr19:36210791-36210792	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
34	rs371770709	chr19:36210801-36210802	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
35	rs374930339	chr19:36210842-36210843	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
36	rs201941055	chr19:36210847-36210848	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
37	rs372461352	chr19:36210849-36210850	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
38	rs201597731	chr19:36210850-36210851	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
39	rs376781845	chr19:36210868-36210869	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
40	rs369788045	chr19:36210869-36210870	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
41	rs200386275	chr19:36210896-36210897	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
42	rs377667885	chr19:36210902-36210903	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
43	rs369563501	chr19:36210908-36210909	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
44	rs531663002	chr19:36210925-36210926	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
45	rs373933410	chr19:36210926-36210927	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
46	rs553680837	chr19:36210940-36210941	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
47	rs76288067	chr19:36210985-36210986	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Flanking Active TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
48	rs183287776	chr19:36211008-36211009	Weak transcription Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
49	rs370485207	chr19:36211026-36211027	Weak transcription Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
50	rs539229419	chr19:36211066-36211067	Weak transcription Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:62)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Ovarian cancer	21397856	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Ovarian cancer	20844748	CNVD
Non-small cell lung cancer	21829676	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Cancer	21183584	CNVD
Honadal dysgenesis	21048976	CNVD
Neurodevelopmental disorder	22521361	CNVD
Endometrial cancer	23636398	CNVD
Disorders of sex development	21048976	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Invasive pancreatic ductal carcinoma	18765526	CNVD
Rhabdomyosarcoma	16790082	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Gastric cancer	21811585	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Glioma	17123091	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD
Lung cancer	21569311	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:4184 , 50 per page) page: 1 2 3 4 5 6 7 ... 84

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:36206800-36210400	Active TSS	iPS-18 Cell Line	embryonic stem cell
2	chr19:36207000-36210400	Active TSS	iPS-15b Cell Line	embryonic stem cell
3	chr19:36207000-36210400	Active TSS	Pancreatic Islets	Pancreatic Islet
4	chr19:36207200-36210600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr19:36207800-36210400	Active TSS	HSMMtube	muscle
6	chr19:36207800-36210600	Active TSS	HSMM	muscle
7	chr19:36209200-36210400	Flanking Active TSS	Primary B cells from cord blood	blood
8	chr19:36209200-36210400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr19:36209400-36210400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr19:36209400-36210400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
11	chr19:36209400-36210400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
12	chr19:36209400-36210400	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
13	chr19:36209400-36210400	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
14	chr19:36209400-36210400	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr19:36209400-36210400	Flanking Active TSS	Brain Germinal Matrix	brain
16	chr19:36209400-36210400	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
17	chr19:36209400-36210400	Active TSS	Fetal Kidney	kidney
18	chr19:36209400-36210400	Flanking Active TSS	Fetal Muscle Trunk	muscle
19	chr19:36209400-36210400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
20	chr19:36209400-36210600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr19:36209400-36210600	Flanking Active TSS	Adipose Nuclei	Adipose
22	chr19:36209400-36210600	Flanking Active TSS	Duodenum Mucosa	Duodenum
23	chr19:36209400-36210600	Flanking Active TSS	Fetal Brain Male	brain
24	chr19:36209400-36210600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
25	chr19:36209600-36210400	Flanking Active TSS	Primary hematopoietic stem cells	blood
26	chr19:36209600-36210400	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
27	chr19:36209600-36210400	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr19:36209600-36210400	Flanking Active TSS	Fetal Thymus	thymus
29	chr19:36209600-36210400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
30	chr19:36209600-36210400	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
31	chr19:36209600-36210400	Flanking Active TSS	Rectal Smooth Muscle	rectum
32	chr19:36209600-36210400	Flanking Active TSS	Right Ventricle	heart
33	chr19:36209600-36210400	Flanking Active TSS	NH-A	brain
34	chr19:36209600-36210600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr19:36209600-36210600	Flanking Active TSS	Liver	Liver
36	chr19:36209600-36210600	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
37	chr19:36209600-36210600	Flanking Active TSS	Fetal Brain Female	brain
38	chr19:36209600-36210800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr19:36209800-36210400	Flanking Active TSS	H1 Cell Line	embryonic stem cell
40	chr19:36209800-36210400	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr19:36209800-36210400	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr19:36209800-36210400	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
43	chr19:36209800-36210400	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
44	chr19:36209800-36210400	Flanking Active TSS	Fetal Intestine Large	intestine
45	chr19:36209800-36210400	Flanking Active TSS	Right Atrium	heart
46	chr19:36209800-36210400	Flanking Active TSS	Sigmoid Colon	Sigmoid Colon
47	chr19:36209800-36210400	Flanking Active TSS	K562	blood
48	chr19:36209800-36210400	Flanking Active TSS	Osteobl	bone
49	chr19:36209800-36210600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr19:36209800-36210600	Flanking Active TSS	Muscle Satellite Cultured Cells	--

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