Variant report

No.	Distal block	Cell Line	Cell type
1	chr4:127655542..127661109-chr4:127874426..127880524,8	K562	blood:
2	chr4:127718291..127720772-chr4:127873279..127876126,2	K562	blood:
3	chr4:127696264..127698678-chr4:127874695..127876616,2	K562	blood:
4	chr4:127857216..127859909-chr4:127872458..127875029,2	K562	blood:
5	chr4:127836337..127838086-chr4:127874738..127876500,2	K562	blood:
6	chr4:127694991..127697764-chr4:127874695..127878637,6	K562	blood:

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10023546	0.92[YRI][hapmap]
rs10034583	0.81[YRI][hapmap]
rs11098905	0.84[EUR][1000 genomes]
rs11721464	0.84[EUR][1000 genomes]
rs11723829	0.90[EUR][1000 genomes]
rs11736547	0.90[EUR][1000 genomes]
rs12504419	0.91[CEU][hapmap];0.84[EUR][1000 genomes]
rs12508997	0.84[EUR][1000 genomes]
rs12509001	0.84[EUR][1000 genomes]
rs12512914	0.84[EUR][1000 genomes]
rs12647550	0.92[CEU][hapmap]
rs12647626	0.88[CEU][hapmap]
rs13101381	0.84[EUR][1000 genomes]
rs13101547	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13107386	0.90[EUR][1000 genomes]
rs13107479	0.84[EUR][1000 genomes]
rs13111315	0.98[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs13138236	0.83[EUR][1000 genomes]
rs13141720	0.85[EUR][1000 genomes]
rs1510680	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17011876	0.90[EUR][1000 genomes]
rs1877072	0.90[EUR][1000 genomes]
rs1995906	0.84[EUR][1000 genomes]
rs1995907	0.90[EUR][1000 genomes]
rs2048379	0.84[EUR][1000 genomes]
rs2221774	0.87[EUR][1000 genomes]
rs34597806	0.84[EUR][1000 genomes]
rs4833362	0.85[EUR][1000 genomes]
rs6534592	0.82[EUR][1000 genomes]
rs6837327	0.91[EUR][1000 genomes]
rs6845689	0.88[CEU][hapmap];0.87[GIH][hapmap]
rs6848070	0.84[EUR][1000 genomes]
rs7656486	0.81[YRI][hapmap]
rs7667742	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7685181	0.96[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs9942226	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428773	chr4:127760014-127913973	Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv830055	chr4:127794875-127993821	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv879913	chr4:127844803-127948196	Weak transcription Enhancers Genic enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10016117	ANKRD50	cis	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127873000-127879600	Active TSS	K562	blood

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