Variant report

No.	Distal block	Cell Line	Cell type
1	chr4:127890829..127893804-chr4:127895608..127897503,2	K562	blood:
2	chr4:127887278..127889160-chr4:127890616..127894072,4	K562	blood:
3	chr4:127882715..127885766-chr4:127890453..127894088,4	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10014196	0.90[EUR][1000 genomes]
rs10016117	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1155256	0.95[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs12502193	0.88[EUR][1000 genomes]
rs12504419	0.86[CEU][hapmap]
rs12647550	0.96[CEU][hapmap]
rs12647626	0.95[CEU][hapmap]
rs13101547	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13123992	0.84[EUR][1000 genomes]
rs1397433	0.84[EUR][1000 genomes]
rs1510680	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1533089	0.85[EUR][1000 genomes]
rs1567491	0.90[EUR][1000 genomes]
rs17011922	0.93[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs1995904	0.83[EUR][1000 genomes]
rs2221774	0.81[EUR][1000 genomes]
rs34872217	0.90[EUR][1000 genomes]
rs60923968	0.86[EUR][1000 genomes]
rs67251456	0.82[EUR][1000 genomes]
rs6814753	0.83[EUR][1000 genomes]
rs6845689	0.96[CEU][hapmap]
rs7654524	0.86[JPT][hapmap]
rs925374	0.83[EUR][1000 genomes]
rs997404	0.93[AFR][1000 genomes];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428773	chr4:127760014-127913973	Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv830055	chr4:127794875-127993821	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv879913	chr4:127844803-127948196	Weak transcription Enhancers Genic enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127891200-127898200	Weak transcription	Stomach Smooth Muscle	stomach
2	chr4:127891400-127893000	Weak transcription	Fetal Muscle Leg	muscle
3	chr4:127891400-127894200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr4:127892600-127898600	Weak transcription	K562	blood

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