Variant report

Variant rs1001717
Chromosome Location chr5:43127149-43127150
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43122600-43129200 Weak transcription Gastric stomach
2 chr5:43122600-43131200 Weak transcription Esophagus oesophagus
3 chr5:43122600-43141600 Weak transcription Pancreas Pancrea
4 chr5:43122600-43156200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr5:43122600-43163400 Weak transcription Placenta Amnion Placenta Amnion
6 chr5:43122800-43127400 Weak transcription Ovary ovary
7 chr5:43122800-43128800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr5:43122800-43154600 Weak transcription Aorta Aorta
9 chr5:43122800-43156400 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr5:43122800-43174200 Weak transcription Colonic Mucosa Colon
11 chr5:43123000-43132000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr5:43123400-43127800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr5:43123400-43129600 Genic enhancers Primary T helper cells fromperipheralblood blood
14 chr5:43123600-43130000 Strong transcription Fetal Muscle Trunk muscle
15 chr5:43123800-43127400 Weak transcription Stomach Smooth Muscle stomach
16 chr5:43123800-43129400 Strong transcription H1 Cell Line embryonic stem cell
17 chr5:43123800-43129600 Strong transcription H9 Cell Line embryonic stem cell
18 chr5:43123800-43132000 Strong transcription Fetal Muscle Leg muscle
19 chr5:43123800-43144800 Strong transcription HUES64 Cell Line embryonic stem cell
20 chr5:43124000-43127200 Weak transcription Brain Angular Gyrus brain
21 chr5:43124000-43128400 Genic enhancers Primary T helper naive cells fromperipheralblood blood
22 chr5:43124000-43128400 Strong transcription Fetal Lung lung
23 chr5:43124000-43128600 Strong transcription Rectal Mucosa Donor 31 rectum
24 chr5:43124000-43128800 Strong transcription Fetal Adrenal Gland Adrenal Gland
25 chr5:43124000-43129000 Strong transcription NH-A brain
26 chr5:43124000-43129800 Strong transcription HUES48 Cell Line embryonic stem cell
27 chr5:43124000-43129800 Strong transcription iPS-18 Cell Line embryonic stem cell
28 chr5:43124000-43129800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr5:43124000-43130400 Strong transcription Muscle Satellite Cultured Cells --
30 chr5:43124000-43130600 Strong transcription HSMM muscle
31 chr5:43124000-43130800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr5:43124000-43134600 Strong transcription HUES6 Cell Line embryonic stem cell
33 chr5:43124000-43142400 Strong transcription iPS-20b Cell Line embryonic stem cell
34 chr5:43124000-43153000 Weak transcription Psoas Muscle Psoas
35 chr5:43124000-43183000 Weak transcription Small Intestine intestine
36 chr5:43124200-43128400 Genic enhancers Primary T helper cells PMA-I stimulated --
37 chr5:43124200-43128400 Strong transcription Fetal Kidney kidney
38 chr5:43124200-43129800 Strong transcription Placenta Placenta
39 chr5:43124200-43130000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr5:43124200-43133800 Strong transcription Breast Myoepithelial Primary Cells Breast
41 chr5:43124200-43137200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr5:43124200-43145000 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr5:43124200-43147200 Strong transcription Fetal Thymus thymus
44 chr5:43124400-43127400 Weak transcription Brain Hippocampus Middle brain
45 chr5:43124400-43128400 Strong transcription A549 lung
46 chr5:43124400-43128400 Strong transcription HMEC breast
47 chr5:43124400-43128400 Strong transcription HUVEC blood vessel
48 chr5:43124400-43128600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr5:43124400-43130000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr5:43124400-43130000 Strong transcription Skeletal Muscle Female skeletal muscle

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