Variant report

Variant rs13171253
Chromosome Location chr5:43160433-43160434
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43122600-43163400 Weak transcription Placenta Amnion Placenta Amnion
2 chr5:43122800-43174200 Weak transcription Colonic Mucosa Colon
3 chr5:43124000-43183000 Weak transcription Small Intestine intestine
4 chr5:43127600-43178000 Strong transcription Dnd41 blood
5 chr5:43128200-43161000 Weak transcription Rectal Smooth Muscle rectum
6 chr5:43128400-43161400 Weak transcription HSMMtube muscle
7 chr5:43129000-43161400 Weak transcription Colon Smooth Muscle Colon
8 chr5:43133000-43161400 Weak transcription Esophagus oesophagus
9 chr5:43133200-43161400 Weak transcription Fetal Brain Male brain
10 chr5:43137200-43163400 Weak transcription Fetal Kidney kidney
11 chr5:43137800-43161000 Weak transcription HSMM muscle
12 chr5:43141800-43161400 Weak transcription HUVEC blood vessel
13 chr5:43142200-43161400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr5:43143000-43161400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr5:43143400-43178200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr5:43143800-43161400 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr5:43143800-43161400 Weak transcription NHEK skin
18 chr5:43145200-43161400 Weak transcription NH-A brain
19 chr5:43145400-43161400 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr5:43146400-43161200 Weak transcription Liver Liver
21 chr5:43146600-43161400 Weak transcription HMEC breast
22 chr5:43146600-43162200 Strong transcription Breast Myoepithelial Primary Cells Breast
23 chr5:43148200-43162200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr5:43148400-43169800 Strong transcription Hela-S3 cervix
25 chr5:43149800-43161000 Strong transcription Fetal Thymus thymus
26 chr5:43150200-43161200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr5:43150600-43167400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr5:43151000-43161400 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr5:43151200-43160600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr5:43151400-43161000 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr5:43151800-43161000 Weak transcription Brain Germinal Matrix brain
32 chr5:43152800-43161000 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr5:43152800-43161400 Weak transcription Spleen Spleen
34 chr5:43153000-43160800 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr5:43153000-43161400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr5:43153000-43162400 Weak transcription Fetal Intestine Small intestine
37 chr5:43153200-43160600 Weak transcription Placenta Placenta
38 chr5:43153200-43161000 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr5:43153200-43161000 Weak transcription Stomach Smooth Muscle stomach
40 chr5:43153400-43161000 Weak transcription Primary monocytes fromperipheralblood blood
41 chr5:43153400-43161000 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr5:43153400-43161400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr5:43153400-43161400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr5:43153400-43161400 Weak transcription A549 lung
45 chr5:43155000-43161600 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr5:43155200-43163200 Weak transcription Pancreas Pancrea
47 chr5:43155200-43177200 Weak transcription Fetal Heart heart
48 chr5:43155600-43163600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr5:43155800-43161400 Weak transcription Ovary ovary
50 chr5:43155800-43176600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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