Variant report

Variant rs3797306
Chromosome Location chr5:43127925-43127926
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43122600-43129200 Weak transcription Gastric stomach
2 chr5:43122600-43131200 Weak transcription Esophagus oesophagus
3 chr5:43122600-43141600 Weak transcription Pancreas Pancrea
4 chr5:43122600-43156200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr5:43122600-43163400 Weak transcription Placenta Amnion Placenta Amnion
6 chr5:43122800-43128800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr5:43122800-43154600 Weak transcription Aorta Aorta
8 chr5:43122800-43156400 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr5:43122800-43174200 Weak transcription Colonic Mucosa Colon
10 chr5:43123000-43132000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr5:43123400-43129600 Genic enhancers Primary T helper cells fromperipheralblood blood
12 chr5:43123600-43130000 Strong transcription Fetal Muscle Trunk muscle
13 chr5:43123800-43129400 Strong transcription H1 Cell Line embryonic stem cell
14 chr5:43123800-43129600 Strong transcription H9 Cell Line embryonic stem cell
15 chr5:43123800-43132000 Strong transcription Fetal Muscle Leg muscle
16 chr5:43123800-43144800 Strong transcription HUES64 Cell Line embryonic stem cell
17 chr5:43124000-43128400 Genic enhancers Primary T helper naive cells fromperipheralblood blood
18 chr5:43124000-43128400 Strong transcription Fetal Lung lung
19 chr5:43124000-43128600 Strong transcription Rectal Mucosa Donor 31 rectum
20 chr5:43124000-43128800 Strong transcription Fetal Adrenal Gland Adrenal Gland
21 chr5:43124000-43129000 Strong transcription NH-A brain
22 chr5:43124000-43129800 Strong transcription HUES48 Cell Line embryonic stem cell
23 chr5:43124000-43129800 Strong transcription iPS-18 Cell Line embryonic stem cell
24 chr5:43124000-43129800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr5:43124000-43130400 Strong transcription Muscle Satellite Cultured Cells --
26 chr5:43124000-43130600 Strong transcription HSMM muscle
27 chr5:43124000-43130800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr5:43124000-43134600 Strong transcription HUES6 Cell Line embryonic stem cell
29 chr5:43124000-43142400 Strong transcription iPS-20b Cell Line embryonic stem cell
30 chr5:43124000-43153000 Weak transcription Psoas Muscle Psoas
31 chr5:43124000-43183000 Weak transcription Small Intestine intestine
32 chr5:43124200-43128400 Genic enhancers Primary T helper cells PMA-I stimulated --
33 chr5:43124200-43128400 Strong transcription Fetal Kidney kidney
34 chr5:43124200-43129800 Strong transcription Placenta Placenta
35 chr5:43124200-43130000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr5:43124200-43133800 Strong transcription Breast Myoepithelial Primary Cells Breast
37 chr5:43124200-43137200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr5:43124200-43145000 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr5:43124200-43147200 Strong transcription Fetal Thymus thymus
40 chr5:43124400-43128400 Strong transcription A549 lung
41 chr5:43124400-43128400 Strong transcription HMEC breast
42 chr5:43124400-43128400 Strong transcription HUVEC blood vessel
43 chr5:43124400-43128600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr5:43124400-43130000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr5:43124400-43130000 Strong transcription Skeletal Muscle Female skeletal muscle
46 chr5:43124400-43130200 Strong transcription Duodenum Mucosa Duodenum
47 chr5:43124400-43130600 Strong transcription Liver Liver
48 chr5:43124400-43131600 Strong transcription Fetal Stomach stomach
49 chr5:43124400-43133000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr5:43124400-43133200 Weak transcription Stomach Mucosa stomach

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