Variant report

Variant rs13186549
Chromosome Location chr5:43193060-43193061
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43178000-43193200 Weak transcription Hela-S3 cervix
2 chr5:43190200-43193200 Enhancers Fetal Heart heart
3 chr5:43191000-43193800 Active TSS Brain Cingulate Gyrus brain
4 chr5:43191000-43194200 Active TSS Brain Anterior Caudate brain
5 chr5:43191200-43194200 Active TSS NHDF-Ad bronchial
6 chr5:43191200-43194400 Active TSS Pancreatic Islets Pancreatic Islet
7 chr5:43191200-43194800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
8 chr5:43191600-43193200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
9 chr5:43191600-43193600 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
10 chr5:43191600-43193800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
11 chr5:43191600-43193800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr5:43191600-43194000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
13 chr5:43191600-43194000 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
14 chr5:43191600-43194600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
15 chr5:43191600-43194800 Active TSS Brain Angular Gyrus brain
16 chr5:43191800-43193200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells short term culture blood
17 chr5:43191800-43193200 Flanking Active TSS Esophagus oesophagus
18 chr5:43191800-43193200 Flanking Bivalent TSS/Enh Fetal Intestine Large intestine
19 chr5:43191800-43193200 Flanking Active TSS Pancreas Pancrea
20 chr5:43191800-43193200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
21 chr5:43191800-43193400 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
22 chr5:43191800-43193400 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
23 chr5:43191800-43193400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells blood
24 chr5:43191800-43193400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr5:43191800-43193400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
26 chr5:43191800-43193400 Flanking Bivalent TSS/Enh Thymus Thymus
27 chr5:43191800-43193600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
28 chr5:43191800-43193600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
29 chr5:43191800-43193600 Flanking Bivalent TSS/Enh Colonic Mucosa Colon
30 chr5:43191800-43193600 Active TSS Colon Smooth Muscle Colon
31 chr5:43191800-43193600 Active TSS Gastric stomach
32 chr5:43191800-43193600 Active TSS Psoas Muscle Psoas
33 chr5:43191800-43193800 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr5:43191800-43193800 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
35 chr5:43191800-43193800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
36 chr5:43191800-43194200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
37 chr5:43191800-43195000 Active TSS Brain Substantia Nigra brain
38 chr5:43192000-43193200 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr5:43192000-43193200 Flanking Active TSS Lung lung
40 chr5:43192000-43193400 Flanking Bivalent TSS/Enh Primary monocytes fromperipheralblood blood
41 chr5:43192000-43193400 Flanking Active TSS Muscle Satellite Cultured Cells --
42 chr5:43192000-43193400 Flanking Bivalent TSS/Enh Primary mononuclear cells fromperipheralblood Blood
43 chr5:43192000-43193400 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
44 chr5:43192000-43193600 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
45 chr5:43192000-43193800 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr5:43192000-43193800 Flanking Bivalent TSS/Enh Primary B cells from cord blood blood
47 chr5:43192000-43193800 Active TSS Stomach Mucosa stomach
48 chr5:43192000-43194000 Active TSS Aorta Aorta
49 chr5:43192000-43194000 Active TSS Fetal Brain Female brain
50 chr5:43192000-43194200 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell

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