Variant report

Variant	rs10026373
Chromosome Location	chr4:106760931-106760932
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10050159	0.91[ASW][hapmap];0.91[YRI][hapmap];0.85[AFR][1000 genomes]
rs10050333	0.91[YRI][hapmap];0.85[AFR][1000 genomes]
rs12331437	1.00[ASW][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs17036260	1.00[EUR][1000 genomes]
rs28421902	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28488297	0.82[AFR][1000 genomes]
rs56924509	1.00[EUR][1000 genomes]
rs6832006	1.00[EUR][1000 genomes]
rs6841297	1.00[EUR][1000 genomes]
rs6842870	1.00[EUR][1000 genomes]
rs6850604	0.89[MKK][hapmap];1.00[TSI][hapmap]
rs72956940	1.00[EUR][1000 genomes]
rs72960918	1.00[EUR][1000 genomes]
rs72960924	1.00[EUR][1000 genomes]
rs72969275	1.00[EUR][1000 genomes]
rs7676975	0.91[YRI][hapmap];0.82[AFR][1000 genomes]
rs7691960	1.00[EUR][1000 genomes]
rs7696673	1.00[EUR][1000 genomes]

No data

Chromatin state (count:83 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:106729200-106763400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr4:106730200-106764200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr4:106730800-106761800	Weak transcription	HSMM	muscle
4	chr4:106737000-106768600	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr4:106742000-106761200	Weak transcription	HSMMtube	muscle
6	chr4:106742000-106763600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr4:106742000-106766200	Weak transcription	Rectal Smooth Muscle	rectum
8	chr4:106742400-106766600	Weak transcription	Aorta	Aorta
9	chr4:106743600-106768600	Weak transcription	Primary T helper cells fromperipheralblood	blood
10	chr4:106744000-106768600	Weak transcription	Adipose Nuclei	Adipose
11	chr4:106744200-106764400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
12	chr4:106745000-106763800	Weak transcription	H1 Cell Line	embryonic stem cell
13	chr4:106745800-106769000	Weak transcription	Primary B cells from peripheral blood	blood
14	chr4:106746000-106772200	Weak transcription	Left Ventricle	heart
15	chr4:106746400-106776400	Weak transcription	Gastric	stomach
16	chr4:106747000-106768200	Weak transcription	K562	blood
17	chr4:106747000-106771800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr4:106747400-106767000	Weak transcription	A549	lung
19	chr4:106747400-106772000	Weak transcription	Fetal Intestine Large	intestine
20	chr4:106748200-106763200	Weak transcription	HUES48 Cell Line	embryonic stem cell
21	chr4:106751200-106766200	Weak transcription	Stomach Smooth Muscle	stomach
22	chr4:106751800-106767800	Weak transcription	NH-A	brain
23	chr4:106752600-106762200	Weak transcription	Fetal Muscle Leg	muscle
24	chr4:106752600-106764200	Weak transcription	Brain Hippocampus Middle	brain
25	chr4:106752600-106766600	Weak transcription	H9 Cell Line	embryonic stem cell
26	chr4:106753800-106772000	Weak transcription	Duodenum Mucosa	Duodenum
27	chr4:106754000-106766400	Weak transcription	Rectal Mucosa Donor 29	rectum
28	chr4:106754600-106772400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr4:106755000-106769000	Weak transcription	Right Ventricle	heart
30	chr4:106755600-106766800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
31	chr4:106755600-106779800	Weak transcription	Esophagus	oesophagus
32	chr4:106756400-106768000	Weak transcription	HMEC	breast
33	chr4:106756600-106768600	Weak transcription	Monocytes-CD14+_RO01746	blood
34	chr4:106756800-106764800	Weak transcription	Lung	lung
35	chr4:106756800-106765800	Weak transcription	Skeletal Muscle Female	skeletal muscle
36	chr4:106756800-106770200	Weak transcription	Skeletal Muscle Male	skeletal muscle
37	chr4:106757000-106763000	Weak transcription	Primary hematopoietic stem cells	blood
38	chr4:106757200-106766400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
39	chr4:106757200-106767200	Weak transcription	Primary neutrophils fromperipheralblood	blood
40	chr4:106757200-106779200	Weak transcription	GM12878-XiMat	blood
41	chr4:106757400-106764000	Weak transcription	Primary B cells from cord blood	blood
42	chr4:106757400-106768400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
43	chr4:106757600-106763800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr4:106757600-106764600	Weak transcription	NHEK	skin
45	chr4:106757600-106766000	Weak transcription	Spleen	Spleen
46	chr4:106757600-106766400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr4:106757800-106761200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
48	chr4:106757800-106764600	Weak transcription	Sigmoid Colon	Sigmoid Colon
49	chr4:106757800-106766000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr4:106757800-106768600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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