Variant report

Variant	rs10028631
Chromosome Location	chr4:160367422-160367423
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:159777725..159778652-chr4:160366924..160368192,3	K562	blood:
2	chr4:160124281..160125215-chr4:160367385..160368069,2	MCF-7	breast:
3	chr4:159649689..159651987-chr4:160366857..160368407,2	MCF-7	breast:

rs_ID	r²[population]
rs10013839	1.00[AMR][1000 genomes]
rs10018060	1.00[AMR][1000 genomes]
rs10018205	1.00[AMR][1000 genomes]
rs10018384	1.00[AMR][1000 genomes]
rs10034325	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16999167	1.00[AMR][1000 genomes]
rs17038128	1.00[AMR][1000 genomes]
rs17038144	1.00[AMR][1000 genomes]
rs17038313	1.00[AMR][1000 genomes]
rs28416073	1.00[AMR][1000 genomes]
rs28450538	1.00[AMR][1000 genomes]
rs28537459	0.92[AFR][1000 genomes]
rs28705976	1.00[AMR][1000 genomes]
rs28716121	1.00[AMR][1000 genomes]
rs28808320	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9993097	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:160350600-160367800	Weak transcription	HSMM	muscle
2	chr4:160364200-160368000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr4:160364400-160367600	Weak transcription	NHEK	skin
4	chr4:160364800-160368000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr4:160366200-160367600	Weak transcription	NHDF-Ad	bronchial
6	chr4:160366200-160367800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr4:160366200-160367800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr4:160366200-160367800	Weak transcription	Osteobl	bone
9	chr4:160366400-160367600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr4:160366400-160367800	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr4:160366400-160367800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr4:160366400-160367800	Weak transcription	HMEC	breast
13	chr4:160366800-160367800	Enhancers	Fetal Heart	heart
14	chr4:160366800-160367800	Enhancers	Fetal Lung	lung
15	chr4:160366800-160368000	Enhancers	Cortex derived primary cultured neurospheres	brain
16	chr4:160366800-160368200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr4:160366800-160368200	Enhancers	Skeletal Muscle Male	skeletal muscle
18	chr4:160367000-160367600	Enhancers	GM12878-XiMat	blood
19	chr4:160367000-160367800	Enhancers	NHLF	lung
20	chr4:160367200-160367600	Enhancers	Duodenum Mucosa	Duodenum
21	chr4:160367200-160367600	Enhancers	Right Ventricle	heart
22	chr4:160367200-160367800	Weak transcription	NH-A	brain
23	chr4:160367200-160368000	Enhancers	Skeletal Muscle Female	skeletal muscle
24	chr4:160367200-160368200	Enhancers	Brain Angular Gyrus	brain
25	chr4:160367400-160367600	Enhancers	Left Ventricle	heart
26	chr4:160367400-160368200	Enhancers	iPS-15b Cell Line	embryonic stem cell
27	chr4:160367400-160368200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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