The 2.0 version of rSNPBase

Variant report

Variant rs10034409
Chromosome Location chr4:160216241-160216242
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:160149400-160216800 Weak transcription Small Intestine intestine
2 chr4:160173200-160217400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr4:160186800-160225400 Weak transcription Primary B cells from cord blood blood
4 chr4:160189400-160235200 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr4:160193400-160240200 Weak transcription Gastric stomach
6 chr4:160194400-160235600 Weak transcription Fetal Stomach stomach
7 chr4:160194400-160236600 Weak transcription Primary T cells from cord blood blood
8 chr4:160195200-160225600 Weak transcription Placenta Placenta
9 chr4:160200600-160235600 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr4:160201800-160217200 Weak transcription GM12878-XiMat blood
11 chr4:160203600-160216600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr4:160205200-160216600 Weak transcription Colon Smooth Muscle Colon
13 chr4:160205400-160218200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr4:160205400-160219000 Weak transcription Fetal Intestine Small intestine
15 chr4:160205600-160217600 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr4:160205800-160236400 Weak transcription Pancreas Pancrea
17 chr4:160205800-160260600 Weak transcription Aorta Aorta
18 chr4:160206200-160229000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr4:160207800-160217600 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr4:160209800-160217800 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr4:160210000-160216800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr4:160210000-160217800 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr4:160210000-160229200 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr4:160210200-160217200 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr4:160210600-160225400 Weak transcription Primary hematopoietic stem cells blood
26 chr4:160210600-160238000 Weak transcription Adipose Nuclei Adipose
27 chr4:160210800-160226000 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr4:160211000-160217200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr4:160211200-160217800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr4:160211800-160218200 Weak transcription Brain Substantia Nigra brain
31 chr4:160211800-160219600 Weak transcription HSMM muscle
32 chr4:160212200-160216600 Weak transcription NH-A brain
33 chr4:160212200-160218200 Weak transcription Brain Angular Gyrus brain
34 chr4:160212200-160219600 Weak transcription HSMMtube muscle
35 chr4:160212400-160216400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr4:160212800-160216800 Weak transcription HMEC breast
37 chr4:160212800-160217000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr4:160212800-160217000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr4:160212800-160217600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr4:160213400-160217200 Weak transcription Rectal Smooth Muscle rectum
41 chr4:160213600-160216800 Weak transcription NHEK skin
42 chr4:160213600-160217000 Weak transcription Muscle Satellite Cultured Cells --
43 chr4:160213600-160219600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr4:160213600-160219800 Weak transcription Right Atrium heart
45 chr4:160213800-160217600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr4:160214000-160216400 Weak transcription A549 lung
47 chr4:160214800-160216400 Weak transcription Hela-S3 cervix
48 chr4:160214800-160220400 Enhancers NHLF lung
49 chr4:160215000-160216600 Enhancers Skeletal Muscle Male skeletal muscle
50 chr4:160215000-160217600 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015