Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10036018	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10042118	1.00[EUR][1000 genomes]
rs10053544	1.00[EUR][1000 genomes]
rs10058828	0.99[AFR][1000 genomes]
rs10075715	1.00[EUR][1000 genomes]
rs10077951	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12109558	1.00[EUR][1000 genomes]
rs13355381	1.00[EUR][1000 genomes]
rs13355813	1.00[EUR][1000 genomes]
rs13362082	1.00[EUR][1000 genomes]
rs1835913	1.00[EUR][1000 genomes]
rs1835914	1.00[EUR][1000 genomes]
rs2288779	1.00[EUR][1000 genomes]
rs41381548	1.00[EUR][1000 genomes]
rs56306866	1.00[EUR][1000 genomes]
rs6580540	1.00[EUR][1000 genomes]
rs6580541	1.00[EUR][1000 genomes]
rs6871631	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6878503	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6879119	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6879289	1.00[EUR][1000 genomes]
rs6881998	1.00[EUR][1000 genomes]
rs6883576	1.00[EUR][1000 genomes]
rs6891158	1.00[EUR][1000 genomes]
rs73266460	1.00[EUR][1000 genomes]
rs73278528	1.00[EUR][1000 genomes]
rs73278535	1.00[EUR][1000 genomes]
rs73795067	1.00[EUR][1000 genomes]
rs73795069	1.00[EUR][1000 genomes]
rs7708548	1.00[EUR][1000 genomes]
rs9325099	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9325100	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830516	chr5:147801104-147966093	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:147849400-147855600	Weak transcription	Fetal Brain Male	brain
2	chr5:147849600-147856000	Weak transcription	Brain Anterior Caudate	brain
3	chr5:147854000-147861200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr5:147855000-147855600	Enhancers	Fetal Heart	heart

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