The 2.0 version of rSNPBase

Variant report

Variant rs10039272
Chromosome Location chr5:50043004-50043005
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:50039200-50067200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr5:50040000-50069200 Weak transcription H1 Cell Line embryonic stem cell
3 chr5:50040400-50059600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr5:50041000-50043600 Enhancers Primary T helper naive cells from peripheral blood blood
5 chr5:50041200-50043600 Enhancers Primary T killer naive cells fromperipheralblood blood
6 chr5:50041200-50043800 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr5:50041400-50043200 Enhancers Primary T helper 17 cells PMA-I stimulated --
8 chr5:50041400-50043200 Enhancers Primary T helper cells fromperipheralblood blood
9 chr5:50041400-50043200 Enhancers Primary T regulatory cells fromperipheralblood blood
10 chr5:50041400-50045800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr5:50041400-50058400 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr5:50041400-50068800 Weak transcription Primary hematopoietic stem cells blood
13 chr5:50041600-50043200 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr5:50041600-50044000 Weak transcription Primary monocytes fromperipheralblood blood
15 chr5:50041600-50047000 Enhancers Dnd41 blood
16 chr5:50041600-50049600 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr5:50041800-50044000 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr5:50041800-50044000 Weak transcription Stomach Mucosa stomach
19 chr5:50041800-50044600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr5:50041800-50044800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr5:50041800-50045000 Weak transcription Primary T cells fromperipheralblood blood
22 chr5:50041800-50048000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr5:50041800-50048200 Enhancers Primary T helper cells PMA-I stimulated --
24 chr5:50041800-50055000 Weak transcription GM12878-XiMat blood
25 chr5:50041800-50056400 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr5:50041800-50057600 Weak transcription Primary B cells from cord blood blood
27 chr5:50041800-50069200 Weak transcription Adipose Nuclei Adipose
28 chr5:50041800-50070200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr5:50041800-50090000 Weak transcription Small Intestine intestine
30 chr5:50042000-50057800 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr5:50042600-50043200 Enhancers Primary Natural Killer cells fromperipheralblood blood
32 chr5:50042600-50044200 Weak transcription Primary T cells from cord blood blood
33 chr5:50042800-50044000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr5:50043000-50043200 Enhancers Right Atrium heart
35 chr5:50043000-50044000 Weak transcription Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015