The 2.0 version of rSNPBase

Variant report

Variant rs10047079
Chromosome Location chr1:154468135-154468136
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:154458600-154469000 Weak transcription Small Intestine intestine
2 chr1:154461800-154473800 Weak transcription Pancreas Pancrea
3 chr1:154464000-154472400 Weak transcription Lung lung
4 chr1:154464800-154469800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
5 chr1:154465000-154469000 Weak transcription Left Ventricle heart
6 chr1:154465000-154469000 Weak transcription Right Atrium heart
7 chr1:154466200-154469400 Weak transcription Fetal Lung lung
8 chr1:154466200-154469800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr1:154466200-154469800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr1:154466400-154468200 Enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr1:154466400-154469000 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr1:154466400-154469000 Weak transcription Fetal Thymus thymus
13 chr1:154466400-154469000 Weak transcription Spleen Spleen
14 chr1:154466400-154469400 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr1:154466400-154469400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:154466400-154469400 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr1:154466400-154471600 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr1:154466600-154469000 Weak transcription K562 blood
19 chr1:154466600-154469400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr1:154466600-154471200 Weak transcription Brain Hippocampus Middle brain
21 chr1:154466800-154468200 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr1:154467000-154469000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr1:154467000-154469400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr1:154467200-154468200 Enhancers Skeletal Muscle Female skeletal muscle
25 chr1:154467400-154469800 Enhancers Adipose Nuclei Adipose
26 chr1:154467400-154470000 Enhancers Primary T cells from cord blood blood
27 chr1:154467400-154470400 Enhancers Primary hematopoietic stem cells short term culture blood
28 chr1:154467600-154468200 Enhancers Fetal Adrenal Gland Adrenal Gland
29 chr1:154467600-154468200 Enhancers Right Ventricle heart
30 chr1:154467600-154468400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:154467600-154470000 Enhancers Primary T helper cells PMA-I stimulated --
32 chr1:154467600-154470600 Enhancers Primary B cells from cord blood blood
33 chr1:154467600-154470600 Enhancers Primary B cells from peripheral blood blood
34 chr1:154467800-154469800 Enhancers Primary T helper naive cells from peripheral blood blood
35 chr1:154467800-154470000 Enhancers Primary T helper cells fromperipheralblood blood
36 chr1:154467800-154470400 Enhancers Primary hematopoietic stem cells blood
37 chr1:154467800-154470600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr1:154467800-154470600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:154467800-154470600 Enhancers Liver Liver
40 chr1:154468000-154468200 Enhancers Primary T cells fromperipheralblood blood
41 chr1:154468000-154468200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
42 chr1:154468000-154468200 Bivalent Enhancer Fetal Muscle Leg muscle
43 chr1:154468000-154469400 Enhancers GM12878-XiMat blood
44 chr1:154468000-154469600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
45 chr1:154468000-154469800 Enhancers Primary T killer naive cells fromperipheralblood blood
46 chr1:154468000-154469800 Enhancers Primary T killer memory cells from peripheral blood blood
47 chr1:154468000-154470000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr1:154468000-154470000 Enhancers Primary monocytes fromperipheralblood blood
49 chr1:154468000-154470200 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr1:154468000-154470200 Flanking Active TSS HUVEC blood vessel

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Last update: Aug 31, 2015