The 2.0 version of rSNPBase

Variant report

Variant rs73018293
Chromosome Location chr1:154465577-154465578
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:154451600-154465600 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr1:154458600-154469000 Weak transcription Small Intestine intestine
3 chr1:154459400-154465600 Weak transcription Liver Liver
4 chr1:154461400-154466400 Enhancers Spleen Spleen
5 chr1:154461800-154465600 Enhancers Adipose Nuclei Adipose
6 chr1:154461800-154465800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:154461800-154467000 Enhancers Primary monocytes fromperipheralblood blood
8 chr1:154461800-154473800 Weak transcription Pancreas Pancrea
9 chr1:154462800-154467200 Enhancers Primary B cells from peripheral blood blood
10 chr1:154463000-154468000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:154463200-154466200 Weak transcription Duodenum Mucosa Duodenum
12 chr1:154463200-154467600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr1:154464000-154466600 Enhancers Skeletal Muscle Male skeletal muscle
14 chr1:154464000-154472400 Weak transcription Lung lung
15 chr1:154464200-154465800 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr1:154464200-154466600 Enhancers Primary neutrophils fromperipheralblood blood
17 chr1:154464200-154466800 Enhancers Primary hematopoietic stem cells blood
18 chr1:154464200-154467600 Weak transcription Right Ventricle heart
19 chr1:154464400-154465600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr1:154464600-154465800 Enhancers Primary T cells from cord blood blood
21 chr1:154464600-154465800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
22 chr1:154464600-154466000 Weak transcription Colon Smooth Muscle Colon
23 chr1:154464600-154466000 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr1:154464600-154466400 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr1:154464600-154466600 Enhancers Primary T helper cells PMA-I stimulated --
26 chr1:154464600-154466600 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr1:154464600-154467000 Enhancers Primary T helper 17 cells PMA-I stimulated --
28 chr1:154464800-154466000 Bivalent Enhancer Fetal Thymus thymus
29 chr1:154464800-154466200 Enhancers Brain Anterior Caudate brain
30 chr1:154464800-154466600 Enhancers Primary T helper naive cells from peripheral blood blood
31 chr1:154464800-154466600 Enhancers Primary T helper naive cells fromperipheralblood blood
32 chr1:154464800-154466600 Enhancers Primary T helper cells fromperipheralblood blood
33 chr1:154464800-154466600 Enhancers GM12878-XiMat blood
34 chr1:154464800-154466800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
35 chr1:154464800-154467400 Enhancers Primary T cells fromperipheralblood blood
36 chr1:154464800-154469800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
37 chr1:154465000-154466600 Enhancers K562 blood
38 chr1:154465000-154466600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
39 chr1:154465000-154467000 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr1:154465000-154469000 Weak transcription Left Ventricle heart
41 chr1:154465000-154469000 Weak transcription Right Atrium heart
42 chr1:154465200-154466600 Enhancers Primary T killer memory cells from peripheral blood blood
43 chr1:154465400-154465600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:154465400-154465600 Transcr. at gene 5' and 3' HUVEC blood vessel
45 chr1:154465400-154465800 Enhancers Primary T regulatory cells fromperipheralblood blood
46 chr1:154465400-154466000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr1:154465400-154466000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr1:154465400-154466200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
49 chr1:154465400-154466200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr1:154465400-154466400 Enhancers HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015