The 2.0 version of rSNPBase

Variant report

Variant rs10058681
Chromosome Location chr5:58293041-58293042
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:58268400-58294400 Weak transcription NH-A brain
2 chr5:58268800-58294600 Weak transcription Brain Hippocampus Middle brain
3 chr5:58270200-58297400 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr5:58270800-58295800 Weak transcription Small Intestine intestine
5 chr5:58270800-58297000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr5:58271000-58293600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr5:58271000-58294600 Weak transcription Brain Angular Gyrus brain
8 chr5:58271600-58294400 Weak transcription Brain Cingulate Gyrus brain
9 chr5:58273000-58294400 Weak transcription Brain Anterior Caudate brain
10 chr5:58273800-58294400 Weak transcription Brain Substantia Nigra brain
11 chr5:58277800-58295600 Weak transcription Rectal Smooth Muscle rectum
12 chr5:58278400-58297400 Weak transcription HSMMtube muscle
13 chr5:58278400-58299000 Weak transcription Gastric stomach
14 chr5:58279200-58314000 Weak transcription Primary B cells from cord blood blood
15 chr5:58279400-58317600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr5:58279600-58330400 Weak transcription Fetal Stomach stomach
17 chr5:58279800-58298200 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr5:58280200-58297000 Weak transcription Fetal Heart heart
19 chr5:58280200-58297000 Weak transcription Fetal Kidney kidney
20 chr5:58280200-58297200 Weak transcription Psoas Muscle Psoas
21 chr5:58280200-58299400 Weak transcription Right Ventricle heart
22 chr5:58280400-58297600 Weak transcription Placenta Amnion Placenta Amnion
23 chr5:58281800-58321600 Weak transcription Osteobl bone
24 chr5:58282400-58306600 Weak transcription Fetal Intestine Small intestine
25 chr5:58284000-58296200 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr5:58284400-58297600 Weak transcription Fetal Lung lung
27 chr5:58284400-58299200 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr5:58286200-58294000 Weak transcription Colon Smooth Muscle Colon
29 chr5:58286200-58297000 Weak transcription Stomach Smooth Muscle stomach
30 chr5:58286200-58298400 Weak transcription Fetal Muscle Trunk muscle
31 chr5:58286200-58312800 Weak transcription Lung lung
32 chr5:58286200-58316200 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr5:58286200-58330400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr5:58286200-58330600 Weak transcription Thymus Thymus
35 chr5:58286400-58295800 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr5:58286600-58297400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr5:58286600-58298200 Weak transcription Left Ventricle heart
38 chr5:58286800-58295600 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr5:58286800-58295600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr5:58286800-58312200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr5:58286800-58312600 Weak transcription Fetal Thymus thymus
42 chr5:58286800-58312800 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr5:58287000-58298200 Weak transcription Fetal Muscle Leg muscle
44 chr5:58287200-58294400 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr5:58287200-58297400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr5:58287200-58298400 Weak transcription Primary T cells fromperipheralblood blood
47 chr5:58287400-58301600 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr5:58287600-58297000 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr5:58287800-58293200 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr5:58287800-58293600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015