The 2.0 version of rSNPBase

Variant report

Variant rs13357758
Chromosome Location chr5:58305798-58305799
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:58279200-58314000 Weak transcription Primary B cells from cord blood blood
2 chr5:58279400-58317600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr5:58279600-58330400 Weak transcription Fetal Stomach stomach
4 chr5:58281800-58321600 Weak transcription Osteobl bone
5 chr5:58282400-58306600 Weak transcription Fetal Intestine Small intestine
6 chr5:58286200-58312800 Weak transcription Lung lung
7 chr5:58286200-58316200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr5:58286200-58330400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr5:58286200-58330600 Weak transcription Thymus Thymus
10 chr5:58286800-58312200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr5:58286800-58312600 Weak transcription Fetal Thymus thymus
12 chr5:58286800-58312800 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr5:58288800-58330600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr5:58296000-58312400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr5:58296000-58321600 Weak transcription Aorta Aorta
16 chr5:58298400-58312600 Weak transcription Fetal Lung lung
17 chr5:58298600-58317800 Weak transcription Stomach Smooth Muscle stomach
18 chr5:58299600-58312400 Weak transcription HSMM muscle
19 chr5:58299600-58316600 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr5:58299800-58306600 Weak transcription Fetal Muscle Leg muscle
21 chr5:58299800-58318000 Weak transcription Right Ventricle heart
22 chr5:58301200-58313000 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr5:58302000-58312800 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr5:58302000-58315200 Weak transcription Psoas Muscle Psoas
25 chr5:58302200-58305800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr5:58302200-58306400 Weak transcription Primary hematopoietic stem cells blood
27 chr5:58302400-58312200 Weak transcription Primary T cells fromperipheralblood blood
28 chr5:58302400-58312800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr5:58302400-58316200 Weak transcription Placenta Amnion Placenta Amnion
30 chr5:58302400-58321600 Weak transcription Gastric stomach
31 chr5:58302800-58312600 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr5:58302800-58312800 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr5:58302800-58315200 Weak transcription Colon Smooth Muscle Colon
34 chr5:58303400-58306400 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr5:58303600-58317800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr5:58303800-58306800 Enhancers Primary T helper 17 cells PMA-I stimulated --
37 chr5:58304000-58316800 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr5:58304000-58316800 Weak transcription Rectal Smooth Muscle rectum
39 chr5:58304200-58312200 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr5:58304200-58312400 Weak transcription Hela-S3 cervix
41 chr5:58304800-58312200 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr5:58305200-58306000 Genic enhancers A549 lung
43 chr5:58305200-58306600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr5:58305400-58306000 Enhancers Skeletal Muscle Male skeletal muscle
45 chr5:58305400-58313000 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr5:58305600-58305800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
47 chr5:58305600-58306800 Strong transcription Primary T cells from cord blood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015